Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL117342.1-201ENST00000404861 406 ntBASIC2.03□□□□□ -2.08
RTN3O95197 RNU6-1001P-201ENST00000411265 100 ntBASIC2.03□□□□□ -2.08
RTN3O95197 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
RTN3O95197 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.03□□□□□ -2.08
RTN3O95197 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN3O95197 RPL30P15-201ENST00000457129 321 ntBASIC2.03□□□□□ -2.08
RTN3O95197 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN3O95197 FGF7P4-201ENST00000509595 295 ntBASIC2.03□□□□□ -2.08
RTN3O95197 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.03□□□□□ -2.08
RTN3O95197 SUB1P3-201ENST00000564581 315 ntBASIC2.03□□□□□ -2.08
RTN3O95197 MIR3122-201ENST00000577243 73 ntBASIC2.03□□□□□ -2.08
RTN3O95197 MIR338-201ENST00000636369 67 ntBASIC2.03□□□□□ -2.08
RTN3O95197 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTN3O95197 snoU2-30.2-201ENST00000362805 70 ntBASIC2.02□□□□□ -2.09
RTN3O95197 Y_RNA.70-201ENST00000362886 110 ntBASIC2.02□□□□□ -2.09
RTN3O95197 Y_RNA.259-201ENST00000364619 101 ntBASIC2.02□□□□□ -2.09
RTN3O95197 RNU6-99P-201ENST00000364721 107 ntBASIC2.02□□□□□ -2.09
RTN3O95197 Y_RNA.358-201ENST00000365491 99 ntBASIC2.02□□□□□ -2.09
RTN3O95197 RNU6-890P-201ENST00000384121 107 ntBASIC2.02□□□□□ -2.09
RTN3O95197 Y_RNA.557-201ENST00000384680 107 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR625-201ENST00000385047 85 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR1185-2-201ENST00000408687 86 ntBASIC2.02□□□□□ -2.09
RTN3O95197 RNU6-1304P-201ENST00000411374 106 ntBASIC2.02□□□□□ -2.09
RTN3O95197 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
RTN3O95197 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.02□□□□□ -2.09
RTN3O95197 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
RTN3O95197 AC022493.2-201ENST00000506122 481 ntBASIC2.02□□□□□ -2.09
RTN3O95197 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
RTN3O95197 AC025647.1-201ENST00000517879 253 ntBASIC2.02□□□□□ -2.09
RTN3O95197 AK6P2-201ENST00000549020 471 ntBASIC2.02□□□□□ -2.09
RTN3O95197 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN3O95197 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
RTN3O95197 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR1244-1-201ENST00000612829 85 ntBASIC2.02□□□□□ -2.09
RTN3O95197 AC126177.8-201ENST00000618339 1015 ntBASIC2.02□□□□□ -2.09
RTN3O95197 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN3O95197 MIR1244-3-201ENST00000635744 85 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR1244-2-201ENST00000636449 85 ntBASIC2.02□□□□□ -2.09
RTN3O95197 MIR1244-4-202ENST00000636813 85 ntBASIC2.02□□□□□ -2.09
RTN3O95197 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
RTN3O95197 RNU6-1019P-201ENST00000364424 107 ntBASIC2.01□□□□□ -2.09
RTN3O95197 Y_RNA.263-201ENST00000364659 114 ntBASIC2.01□□□□□ -2.09
RTN3O95197 RNU6-1240P-201ENST00000365155 104 ntBASIC2.01□□□□□ -2.09
RTN3O95197 RNY3P14-201ENST00000384309 102 ntBASIC2.01□□□□□ -2.09
RTN3O95197 MIR329-1-201ENST00000385028 80 ntBASIC2.01□□□□□ -2.09
RTN3O95197 Y_RNA.595-201ENST00000410403 105 ntBASIC2.01□□□□□ -2.09
RTN3O95197 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.01□□□□□ -2.09
RTN3O95197 RPL31P63-201ENST00000422565 375 ntBASIC2.01□□□□□ -2.09
RTN3O95197 MTCO3P10-201ENST00000455912 772 ntBASIC2.01□□□□□ -2.09
RTN3O95197 MIR2053-201ENST00000459295 91 ntBASIC2.01□□□□□ -2.09
RTN3O95197 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.01□□□□□ -2.09
RTN3O95197 MIR2355-201ENST00000517199 87 ntBASIC2.01□□□□□ -2.09
RTN3O95197 AC110588.1-201ENST00000559699 137 ntBASIC2.01□□□□□ -2.09
RTN3O95197 AC080078.3-201ENST00000605407 463 ntBASIC2.01□□□□□ -2.09
RTN3O95197 AC104260.1-201ENST00000616660 539 ntBASIC2.01□□□□□ -2.09
RTN3O95197 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
RTN3O95197 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
RTN3O95197 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTN3O95197 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
RTN3O95197 Y_RNA.226-201ENST00000364337 114 ntBASIC2□□□□□ -2.09
RTN3O95197 SNORA72.2-201ENST00000365028 127 ntBASIC2□□□□□ -2.09
RTN3O95197 MIR515-2-201ENST00000384883 83 ntBASIC2□□□□□ -2.09
RTN3O95197 MIR515-1-201ENST00000384884 83 ntBASIC2□□□□□ -2.09
RTN3O95197 RNY4P36-201ENST00000391116 96 ntBASIC2□□□□□ -2.09
RTN3O95197 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
RTN3O95197 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
RTN3O95197 HMGN2P34-201ENST00000437647 269 ntBASIC2□□□□□ -2.09
RTN3O95197 AC069257.2-201ENST00000441819 155 ntBASIC2□□□□□ -2.09
RTN3O95197 RNU6-470P-201ENST00000515954 104 ntBASIC2□□□□□ -2.09
RTN3O95197 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
RTN3O95197 AC022868.1-201ENST00000517767 391 ntBASIC2□□□□□ -2.09
RTN3O95197 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
RTN3O95197 MTND4LP32-201ENST00000636111 270 ntBASIC2□□□□□ -2.09
RTN3O95197 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTN3O95197 RNU6-1266P-201ENST00000362794 105 ntBASIC1.99□□□□□ -2.09
RTN3O95197 RNU6-1145P-201ENST00000384246 107 ntBASIC1.99□□□□□ -2.09
RTN3O95197 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
RTN3O95197 AC016909.1-201ENST00000415916 166 ntBASIC1.99□□□□□ -2.09
RTN3O95197 EBAG9P1-201ENST00000418955 543 ntBASIC1.99□□□□□ -2.09
RTN3O95197 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.99□□□□□ -2.09
RTN3O95197 TOMM22P2-201ENST00000430735 237 ntBASIC1.99□□□□□ -2.09
RTN3O95197 AC245047.4-201ENST00000433189 144 ntBASIC1.99□□□□□ -2.09
RTN3O95197 UQCRBP2-201ENST00000447827 297 ntBASIC1.99□□□□□ -2.09
RTN3O95197 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.99□□□□□ -2.09
RTN3O95197 ELOCP24-201ENST00000456370 334 ntBASIC1.99□□□□□ -2.09
RTN3O95197 AC112492.4-201ENST00000456549 352 ntBASIC1.99□□□□□ -2.09
RTN3O95197 U8.22-201ENST00000459141 133 ntBASIC1.99□□□□□ -2.09
RTN3O95197 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.99□□□□□ -2.09
RTN3O95197 RNU6-507P-201ENST00000516045 100 ntBASIC1.99□□□□□ -2.09
RTN3O95197 RNU6-120P-201ENST00000516077 103 ntBASIC1.99□□□□□ -2.09
RTN3O95197 RNU6-107P-201ENST00000516643 102 ntBASIC1.99□□□□□ -2.09
RTN3O95197 RNU7-4P-201ENST00000516961 62 ntBASIC1.99□□□□□ -2.09
RTN3O95197 AC091144.1-201ENST00000519573 138 ntBASIC1.99□□□□□ -2.09
RTN3O95197 GNAI2P1-201ENST00000541815 315 ntBASIC1.99□□□□□ -2.09
RTN3O95197 AL355375.2-201ENST00000574825 175 ntBASIC1.99□□□□□ -2.09
RTN3O95197 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RTN3O95197 AC010615.1-201ENST00000594254 1764 ntBASIC1.99□□□□□ -2.09
RTN3O95197 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.99□□□□□ -2.09
RTN3O95197 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms