Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU7-94P-201ENST00000459576 63 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 RPL30P10-201ENST00000488148 337 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 RPS26P48-201ENST00000491713 339 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC010469.2-201ENST00000496412 480 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK1BO75841 AC007834.2-201ENST00000536310 343 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC009248.2-201ENST00000619826 254 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 MIR6863-201ENST00000636112 90 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC090582.1-201ENST00000636321 199 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC099654.12-201ENST00000639868 649 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 RNU6-137P-201ENST00000363680 108 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 SNORD115-32-201ENST00000364079 82 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 Y_RNA.373-201ENST00000365600 103 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AL451046.2-201ENST00000403074 277 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK1BO75841 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 MTND1P11-201ENST00000456661 876 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 snoU13.23-201ENST00000458863 104 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK1BO75841 RNU6-1198P-201ENST00000516904 67 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC091144.1-201ENST00000519573 138 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK1BO75841 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK1BO75841 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
UPK1BO75841 AC090049.2-201ENST00000550377 109 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC015712.3-201ENST00000559380 164 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 POLR3GP2-201ENST00000588366 668 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC063944.3-201ENST00000609969 533 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 MIR6078-201ENST00000611069 100 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AL353997.5-201ENST00000618886 171 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC005858.4-201ENST00000623191 700 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC121333.1-201ENST00000567488 2709 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
UPK1BO75841 Y_RNA.265-201ENST00000364677 108 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 RNU6-793P-201ENST00000384233 104 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 RNU6-424P-201ENST00000384367 105 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 SNORA80D-201ENST00000384488 135 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 RNU6-95P-201ENST00000384697 107 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.66□□□□□ -2.3
UPK1BO75841 AP1B1P2-201ENST00000416196 106 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MTND4P18-201ENST00000447010 465 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MRPS10P1-201ENST00000448483 130 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1BO75841 AC108210.2-201ENST00000503681 201 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1BO75841 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1BO75841 APOOP3-201ENST00000536787 586 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 OSBPL9P5-201ENST00000542581 171 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK1BO75841 ZNF519P2-201ENST00000557032 169 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1BO75841 MTND1P15-201ENST00000579262 949 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC068790.6-201ENST00000602558 258 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 SNORA28-201ENST00000606769 126 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 MIR6079-201ENST00000635807 62 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 ELL2P3-201ENST00000457883 1602 ntBASIC0.66□□□□□ -2.3
UPK1BO75841 AC005592.1-201ENST00000566527 1640 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
UPK1BO75841 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 RNU6-1085P-201ENST00000363576 107 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 RNU6-128P-201ENST00000383976 107 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 MIR517A-201ENST00000385001 87 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 MIR764-201ENST00000390811 85 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 RNU6-159P-201ENST00000391080 106 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 CALM2P3-201ENST00000400429 449 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AC108667.1-201ENST00000428618 249 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 ERLEC1P1-201ENST00000433806 578 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AC104332.1-201ENST00000440471 797 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK1BO75841 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK1BO75841 AC107401.1-201ENST00000503426 685 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 RNU6-107P-201ENST00000516643 102 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 AC078883.4-201ENST00000623218 367 ntBASIC0.65□□□□□ -2.31
UPK1BO75841 Y_RNA.179-201ENST00000363844 90 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 Y_RNA.184-201ENST00000363884 108 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 SNORD116-8-201ENST00000384365 95 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 Y_RNA.481-201ENST00000384373 102 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 Y_RNA.615-201ENST00000410769 117 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 NDUFA5P4-201ENST00000436704 385 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 OR9P1P-201ENST00000496431 281 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 RNU7-12P-201ENST00000516030 62 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 Y_RNA.665-201ENST00000516177 98 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 AP002001.1-203ENST00000534002 267 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 AL158211.1-201ENST00000566763 763 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms