Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNY1P16-201ENST00000363063 111 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU6-331P-201ENST00000384724 107 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 SNORA75.4-201ENST00000391278 119 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU6-370P-201ENST00000411008 104 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU7-57P-201ENST00000459540 60 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 SCARNA16.2-201ENST00000516520 172 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 Y_RNA.691-201ENST00000516611 103 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNA5SP384-201ENST00000516615 116 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 SNORA20.3-201ENST00000516880 132 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU6-1213P-201ENST00000517075 94 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.61□□□□□ -2.15
CSDE1O75534 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.61□□□□□ -2.15
CSDE1O75534 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.61□□□□□ -2.15
CSDE1O75534 AC005899.2-201ENST00000584353 90 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RBM11P1-201ENST00000604951 799 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 AC022513.1-201ENST00000624512 117 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 AC008873.1-201ENST00000625051 138 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 AL669831.3-213ENST00000636676 183 ntBASIC1.61□□□□□ -2.15
CSDE1O75534 RNU1-62P-201ENST00000362599 164 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 RNU6-862P-201ENST00000362804 105 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 Y_RNA.106-201ENST00000363189 100 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 Y_RNA.179-201ENST00000363844 90 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 SNORD87-201ENST00000364849 89 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 RNU6-1283P-201ENST00000365314 105 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 Y_RNA.390-201ENST00000383932 102 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 Y_RNA.404-201ENST00000383978 102 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 RNU6-793P-201ENST00000384233 104 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC092423.1-201ENST00000430165 186 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.6□□□□□ -2.15
CSDE1O75534 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC091179.3-201ENST00000474761 144 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AL163540.1-201ENST00000485382 386 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 HMGN1P12-201ENST00000499125 195 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.6□□□□□ -2.15
CSDE1O75534 RNU6-1114P-201ENST00000516022 107 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AL161670.1-201ENST00000554348 137 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC005730.3-201ENST00000583067 366 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC069114.2-201ENST00000604699 304 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 AC068205.3-201ENST00000636385 468 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
CSDE1O75534 MTND5P16-201ENST00000460269 1703 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
CSDE1O75534 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 RNU1-96P-201ENST00000364163 162 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 Y_RNA.415-201ENST00000384012 112 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 MIR10B-201ENST00000385011 110 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 MIR1253-201ENST00000408273 105 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 RNU4-14P-201ENST00000410858 122 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 AC060773.1-201ENST00000421698 310 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
CSDE1O75534 MTCYBP10-201ENST00000424905 650 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.59□□□□□ -2.15
CSDE1O75534 AC116353.2-201ENST00000505332 712 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 AC010999.1-201ENST00000611856 324 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 snoZ196.1-201ENST00000625269 89 ntBASIC1.59□□□□□ -2.15
CSDE1O75534 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.59□□□□□ -2.15
CSDE1O75534 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CSDE1O75534 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.58□□□□□ -2.16
CSDE1O75534 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CSDE1O75534 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
CSDE1O75534 MIR190B-201ENST00000401119 79 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 RNA5SP504-201ENST00000410676 117 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 RNU6-1304P-201ENST00000411374 106 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC007098.1-201ENST00000420122 367 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.58□□□□□ -2.16
CSDE1O75534 HMGN2P34-201ENST00000437647 269 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 SNORA31.17-201ENST00000516953 127 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC093023.1-201ENST00000547375 507 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AL121579.1-201ENST00000555129 305 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC004584.2-201ENST00000570407 410 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 MIR5701-3-201ENST00000578890 82 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 MIR5701-1-201ENST00000585138 82 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AL355073.2-201ENST00000612106 557 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 MIR5701-2-201ENST00000615634 82 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 AC092794.2-201ENST00000620933 563 ntBASIC1.58□□□□□ -2.16
CSDE1O75534 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
CSDE1O75534 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
CSDE1O75534 AL391987.6-201ENST00000305671 199 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 SNORA67.2-201ENST00000384300 149 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSDE1O75534 RNU2-7P-201ENST00000410794 178 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.57□□□□□ -2.16
CSDE1O75534 AC099677.2-201ENST00000436385 175 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC010409.1-201ENST00000487382 476 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms