Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MTND4LP30-201ENST00000454092 297 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 HMGN2P9-201ENST00000476875 229 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS4BO75351 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS4BO75351 ATP5EP1-201ENST00000510257 156 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
VPS4BO75351 MIR449C-201ENST00000516047 92 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AC022616.8-201ENST00000533569 253 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS4BO75351 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AC008749.1-201ENST00000597650 306 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4BO75351 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS4BO75351 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4BO75351 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4BO75351 Y_RNA.60-201ENST00000362831 98 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 SNORD31B-201ENST00000364977 69 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 Y_RNA.331-201ENST00000365267 102 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4BO75351 MIR548B-201ENST00000385247 97 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 RNA5SP475-201ENST00000410568 110 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS4BO75351 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 RNU2-31P-201ENST00000516954 155 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 AC004486.1-201ENST00000546846 233 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 AC005357.1-201ENST00000588399 301 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 MIR1248-201ENST00000629190 106 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VPS4BO75351 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4BO75351 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS4BO75351 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS4BO75351 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4BO75351 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
VPS4BO75351 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VPS4BO75351 RNU6-859P-201ENST00000362728 107 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 U8.2-201ENST00000363156 134 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 RNU1-23P-201ENST00000363361 144 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 Y_RNA.361-201ENST00000365515 120 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 RNU6-546P-201ENST00000383991 107 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 Y_RNA.569-201ENST00000384749 103 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VPS4BO75351 MIR1283-1-201ENST00000408494 87 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 AC016925.1-201ENST00000458303 298 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 RNU7-14P-201ENST00000459331 62 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS4BO75351 RNU1-117P-201ENST00000517041 158 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS4BO75351 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 MIR4769-201ENST00000584126 77 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
VPS4BO75351 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.62□□□□□ -1.99
VPS4BO75351 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS4BO75351 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS4BO75351 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS4BO75351 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS4BO75351 RNU6-545P-201ENST00000362681 104 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 Y_RNA.243-201ENST00000364481 109 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 SNORA72.2-201ENST00000365028 127 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 Y_RNA.418-201ENST00000384029 102 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RNU6-1026P-201ENST00000384465 108 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 Y_RNA.539-201ENST00000384635 107 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RNU6-907P-201ENST00000390924 102 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 SNORA53-201ENST00000391141 249 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 MIR1185-2-201ENST00000408687 86 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RNU2-32P-201ENST00000411193 191 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 Y_RNA.673-201ENST00000516306 88 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RNU6-388P-201ENST00000517012 105 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RNU6-389P-201ENST00000517048 105 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS4BO75351 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS4BO75351 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS4BO75351 AC010900.2-201ENST00000604508 210 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 AC005828.6-201ENST00000606610 232 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 U2.14-201ENST00000615943 113 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 AC141273.2-201ENST00000618989 130 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
VPS4BO75351 AC009487.4-201ENST00000624969 3585 ntBASIC2.61□□□□□ -1.99
VPS4BO75351 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS4BO75351 RNY1-201ENST00000364228 113 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 RNU6-1305P-201ENST00000364353 104 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 Y_RNA.257-201ENST00000364596 102 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 SNORA20.1-201ENST00000364790 130 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 Y_RNA.383-201ENST00000383855 97 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS4BO75351 AL603910.2-201ENST00000407268 136 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 RNU2-63P-201ENST00000410792 194 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 AL445687.1-201ENST00000439946 251 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS4BO75351 RPL23AP3-201ENST00000453844 468 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 AC018868.1-201ENST00000491307 315 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms