Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 USP9YP16-201ENST00000430287 407 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 USP9YP23-201ENST00000455085 407 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 AC046134.1-201ENST00000514454 666 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 RNU6-107P-201ENST00000516643 102 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 AL121579.1-201ENST00000555129 305 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.66□□□□□ -2.14
PLOD3O60568 MIR7843-201ENST00000622274 79 ntBASIC1.66□□□□□ -2.14
PLOD3O60568 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
PLOD3O60568 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 RNU6-845P-201ENST00000362578 103 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PLOD3O60568 RNU6-842P-201ENST00000384269 107 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 MIR10B-201ENST00000385011 110 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 MIR504-201ENST00000385065 83 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 MIR548K-201ENST00000408406 116 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
PLOD3O60568 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.65□□□□□ -2.15
PLOD3O60568 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.65□□□□□ -2.15
PLOD3O60568 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.65□□□□□ -2.15
PLOD3O60568 PRDX4P1-201ENST00000507189 574 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 RNU6-1114P-201ENST00000516022 107 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 AL161722.3-201ENST00000605789 2983 ntBASIC1.65□□□□□ -2.15
PLOD3O60568 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PLOD3O60568 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PLOD3O60568 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
PLOD3O60568 Y_RNA.279-201ENST00000364763 95 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RNA5SP109-201ENST00000391010 116 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RNU6-700P-201ENST00000391043 107 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 SNORA40.18-201ENST00000391200 128 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RPL21P1-201ENST00000399532 476 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 Y_RNA.594-201ENST00000410373 140 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RNU6-1050P-201ENST00000410388 107 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 MTND3P23-201ENST00000431980 347 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC027119.1-201ENST00000440877 241 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 MTND4P17-201ENST00000470444 350 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RPL7P42-201ENST00000481005 679 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.64□□□□□ -2.15
PLOD3O60568 Y_RNA.683-201ENST00000516508 93 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 RNU6-1016P-201ENST00000516689 94 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 CYCSP23-201ENST00000519781 313 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 CBX3P8-201ENST00000532412 525 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC090617.3-201ENST00000573670 475 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC018462.2-201ENST00000605375 395 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AL355802.3-201ENST00000607571 545 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 PISRT1.1-201ENST00000616930 107 ntBASIC1.64□□□□□ -2.15
PLOD3O60568 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PLOD3O60568 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PLOD3O60568 RNU6-593P-201ENST00000364716 112 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 MIR1289-2-201ENST00000408360 111 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 RPL23AP50-201ENST00000434149 455 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 MTND4P18-201ENST00000447010 465 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 MTND3P10-201ENST00000450967 341 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.63□□□□□ -2.15
PLOD3O60568 RPS29P23-201ENST00000458635 123 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 AC026782.1-201ENST00000512952 449 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 Y_RNA.670-201ENST00000516255 105 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PLOD3O60568 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 AC011494.1-201ENST00000596454 237 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 MZT1P2-201ENST00000604387 248 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 uc_338.5-201ENST00000611839 155 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 AC040896.1-201ENST00000613819 479 ntBASIC1.63□□□□□ -2.15
PLOD3O60568 RNU6-1123P-201ENST00000362347 106 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 Y_RNA.88-201ENST00000363029 99 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 Y_RNA.390-201ENST00000383932 102 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 RNU11-5P-201ENST00000391216 129 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 RNU6-1304P-201ENST00000411374 106 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 AL353997.1-201ENST00000432936 108 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 AL135790.2-201ENST00000437701 267 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 RNU7-94P-201ENST00000459576 63 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.62□□□□□ -2.15
PLOD3O60568 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 Y_RNA.708-201ENST00000516950 96 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 PRR13P7-201ENST00000605538 430 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 AC009229.3-201ENST00000608056 282 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.62□□□□□ -2.15
PLOD3O60568 TPTEP1-208ENST00000636884 213 ntBASIC1.62□□□□□ -2.15
PLOD3O60568 Y_RNA.106-201ENST00000363189 100 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 SNORD81.2-201ENST00000365153 76 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
PLOD3O60568 RNU1-139P-201ENST00000391307 165 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 FGF7P8-201ENST00000402994 292 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 PDCL2P1-201ENST00000419302 352 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 TOMM22P2-201ENST00000430735 237 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 AC098614.3-201ENST00000438957 440 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 RBMX2P4-201ENST00000441256 376 ntBASIC1.61□□□□□ -2.15
PLOD3O60568 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms