Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNU4-82P-201ENST00000362443 140 ntBASIC1.7□□□□□ -2.14
SNX3O60493 RNU6-1301P-201ENST00000362724 104 ntBASIC1.7□□□□□ -2.14
SNX3O60493 SNORA33-201ENST00000363664 130 ntBASIC1.7□□□□□ -2.14
SNX3O60493 Y_RNA.187-201ENST00000363918 113 ntBASIC1.7□□□□□ -2.14
SNX3O60493 Y_RNA.287-201ENST00000364853 94 ntBASIC1.7□□□□□ -2.14
SNX3O60493 RNU6-417P-201ENST00000384712 107 ntBASIC1.7□□□□□ -2.14
SNX3O60493 ELOCP21-201ENST00000412558 336 ntBASIC1.7□□□□□ -2.14
SNX3O60493 AL135786.1-201ENST00000415892 214 ntBASIC1.7□□□□□ -2.14
SNX3O60493 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
SNX3O60493 UQCRBP2-201ENST00000447827 297 ntBASIC1.7□□□□□ -2.14
SNX3O60493 RNU7-169P-201ENST00000459456 61 ntBASIC1.7□□□□□ -2.14
SNX3O60493 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
SNX3O60493 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
SNX3O60493 AC010900.2-201ENST00000604508 210 ntBASIC1.7□□□□□ -2.14
SNX3O60493 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
SNX3O60493 SCARNA15.3-201ENST00000626315 122 ntBASIC1.7□□□□□ -2.14
SNX3O60493 SCARNA4.1-201ENST00000628597 123 ntBASIC1.7□□□□□ -2.14
SNX3O60493 MTND5P10-201ENST00000603719 1809 ntBASIC1.7□□□□□ -2.14
SNX3O60493 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SNX3O60493 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
SNX3O60493 Y_RNA.314-201ENST00000365114 102 ntBASIC1.69□□□□□ -2.14
SNX3O60493 RNU6-1240P-201ENST00000365155 104 ntBASIC1.69□□□□□ -2.14
SNX3O60493 MT-TD-201ENST00000387419 68 ntBASIC1.69□□□□□ -2.14
SNX3O60493 MIR1253-201ENST00000408273 105 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AC008134.1-201ENST00000420943 193 ntBASIC1.69□□□□□ -2.14
SNX3O60493 MTND4P28-201ENST00000426217 387 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX3O60493 AC245047.4-201ENST00000433189 144 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AC236972.2-201ENST00000434979 310 ntBASIC1.69□□□□□ -2.14
SNX3O60493 PCNPP5-201ENST00000452246 481 ntBASIC1.69□□□□□ -2.14
SNX3O60493 Y_RNA.675-201ENST00000516389 149 ntBASIC1.69□□□□□ -2.14
SNX3O60493 RNU7-4P-201ENST00000516961 62 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.69□□□□□ -2.14
SNX3O60493 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AL117336.2-201ENST00000602435 335 ntBASIC1.69□□□□□ -2.14
SNX3O60493 AL008636.1-201ENST00000625038 1018 ntBASIC1.69□□□□□ -2.14
SNX3O60493 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
SNX3O60493 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SNX3O60493 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
SNX3O60493 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SNX3O60493 RNU4-79P-201ENST00000362764 141 ntBASIC1.68□□□□□ -2.14
SNX3O60493 Y_RNA.463-201ENST00000384271 102 ntBASIC1.68□□□□□ -2.14
SNX3O60493 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
SNX3O60493 AL079342.1-201ENST00000401460 267 ntBASIC1.68□□□□□ -2.14
SNX3O60493 CST2P1-201ENST00000425770 87 ntBASIC1.68□□□□□ -2.14
SNX3O60493 AC092473.1-201ENST00000441098 221 ntBASIC1.68□□□□□ -2.14
SNX3O60493 RNU6-1146P-201ENST00000516282 102 ntBASIC1.68□□□□□ -2.14
SNX3O60493 SNORA31.17-201ENST00000516953 127 ntBASIC1.68□□□□□ -2.14
SNX3O60493 MIR2355-201ENST00000517199 87 ntBASIC1.68□□□□□ -2.14
SNX3O60493 CYCSP23-201ENST00000519781 313 ntBASIC1.68□□□□□ -2.14
SNX3O60493 AC084364.2-201ENST00000546924 395 ntBASIC1.68□□□□□ -2.14
SNX3O60493 MIR1273D-201ENST00000577266 86 ntBASIC1.68□□□□□ -2.14
SNX3O60493 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
SNX3O60493 IGHVIII-44-202ENST00000636235 289 ntBASIC1.68□□□□□ -2.14
SNX3O60493 AC092881.1-201ENST00000638218 2733 ntBASIC1.68□□□□□ -2.14
SNX3O60493 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.68□□□□□ -2.14
SNX3O60493 Y_RNA.146-201ENST00000363549 102 ntBASIC1.67□□□□□ -2.14
SNX3O60493 RNU6-1019P-201ENST00000364424 107 ntBASIC1.67□□□□□ -2.14
SNX3O60493 RNU6-867P-201ENST00000364956 107 ntBASIC1.67□□□□□ -2.14
SNX3O60493 MIR634-201ENST00000385208 97 ntBASIC1.67□□□□□ -2.14
SNX3O60493 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SNX3O60493 RNA5SP467-201ENST00000391274 118 ntBASIC1.67□□□□□ -2.14
SNX3O60493 SNORD12B-201ENST00000410433 91 ntBASIC1.67□□□□□ -2.14
SNX3O60493 Y_RNA.605-201ENST00000410577 105 ntBASIC1.67□□□□□ -2.14
SNX3O60493 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX3O60493 AC099799.1-201ENST00000439809 192 ntBASIC1.67□□□□□ -2.14
SNX3O60493 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX3O60493 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX3O60493 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.67□□□□□ -2.14
SNX3O60493 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
SNX3O60493 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX3O60493 SNORA40.9-201ENST00000515895 93 ntBASIC1.67□□□□□ -2.14
SNX3O60493 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX3O60493 AC144568.1-201ENST00000520139 137 ntBASIC1.67□□□□□ -2.14
SNX3O60493 AC018448.1-201ENST00000552843 316 ntBASIC1.67□□□□□ -2.14
SNX3O60493 AC138305.3-201ENST00000624988 240 ntBASIC1.67□□□□□ -2.14
SNX3O60493 AC010615.1-201ENST00000594254 1764 ntBASIC1.67□□□□□ -2.14
SNX3O60493 RNU6-1115P-201ENST00000362490 106 ntBASIC1.66□□□□□ -2.14
SNX3O60493 RNU5E-4P-201ENST00000364931 120 ntBASIC1.66□□□□□ -2.14
SNX3O60493 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SNX3O60493 AC096644.2-201ENST00000429278 159 ntBASIC1.66□□□□□ -2.14
SNX3O60493 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
SNX3O60493 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.66□□□□□ -2.14
SNX3O60493 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.66□□□□□ -2.14
SNX3O60493 CHEK2P4-201ENST00000450340 246 ntBASIC1.66□□□□□ -2.14
SNX3O60493 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.66□□□□□ -2.14
SNX3O60493 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.66□□□□□ -2.14
SNX3O60493 AC074133.1-201ENST00000515696 183 ntBASIC1.66□□□□□ -2.14
SNX3O60493 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.66□□□□□ -2.14
SNX3O60493 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.66□□□□□ -2.14
SNX3O60493 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
SNX3O60493 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.66□□□□□ -2.14
SNX3O60493 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
SNX3O60493 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
SNX3O60493 Y_RNA.315-201ENST00000365117 102 ntBASIC1.65□□□□□ -2.15
SNX3O60493 RNU6-1264P-201ENST00000383891 107 ntBASIC1.65□□□□□ -2.15
SNX3O60493 Y_RNA.498-201ENST00000384460 102 ntBASIC1.65□□□□□ -2.15
SNX3O60493 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
SNX3O60493 Y_RNA.579-201ENST00000390939 94 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms