Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR3145-201ENST00000580727 82 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 MIR3200-201ENST00000580767 85 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 DEFB117-201ENST00000602356 141 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 AC141273.2-201ENST00000618989 130 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.82□□□□□ -1.96
KDM1AO60341 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
KDM1AO60341 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
KDM1AO60341 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KDM1AO60341 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KDM1AO60341 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KDM1AO60341 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KDM1AO60341 RNU4-80P-201ENST00000363200 141 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 Y_RNA.243-201ENST00000364481 109 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU6-1235P-201ENST00000384559 107 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU6-57P-201ENST00000411348 103 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 AC016717.1-201ENST00000448918 286 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 SUMO1P2-201ENST00000452524 304 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU6-498P-201ENST00000459468 107 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU6-221P-201ENST00000459541 99 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 AC093259.1-201ENST00000509755 300 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU6-436P-201ENST00000516171 114 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RNU2-34P-201ENST00000516534 121 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 U6.115-201ENST00000636045 103 ntBASIC2.81□□□□□ -1.96
KDM1AO60341 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.81□□□□□ -1.96
KDM1AO60341 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KDM1AO60341 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.8□□□□□ -1.96
KDM1AO60341 Y_RNA.275-201ENST00000364726 110 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 Y_RNA.329-201ENST00000365209 107 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 Y_RNA.332-201ENST00000365271 113 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 Y_RNA.515-201ENST00000384535 112 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 SNORA44-201ENST00000384584 132 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 MIR512-1-201ENST00000384913 84 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 SNORA48.2-201ENST00000390926 124 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 SNORD58.1-201ENST00000391313 66 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
KDM1AO60341 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.8□□□□□ -1.96
KDM1AO60341 AL139109.1-201ENST00000455491 297 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 AC010531.2-201ENST00000465012 153 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 RNU6-948P-201ENST00000516374 107 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 AC005828.6-201ENST00000606610 232 ntBASIC2.8□□□□□ -1.96
KDM1AO60341 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KDM1AO60341 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KDM1AO60341 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
KDM1AO60341 UBE2WP1-201ENST00000362030 340 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 Y_RNA.361-201ENST00000365515 120 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 RNU6-418P-201ENST00000384035 107 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 AC123900.1-201ENST00000420390 96 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 AC009238.1-201ENST00000442165 424 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
KDM1AO60341 AC009237.6-201ENST00000446969 424 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.79□□□□□ -1.96
KDM1AO60341 RNU6-191P-201ENST00000516295 94 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 RPL21P9-201ENST00000556149 474 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
KDM1AO60341 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
KDM1AO60341 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.96
KDM1AO60341 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 RNU6-338P-201ENST00000383888 105 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 SNORD14D-201ENST00000384390 87 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 RNU6-1248P-201ENST00000391096 64 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.78□□□□□ -1.96
KDM1AO60341 COTL1P1-201ENST00000422309 375 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AC024067.1-201ENST00000426199 223 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
KDM1AO60341 AL357134.1-201ENST00000445848 426 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KDM1AO60341 RNU4-71P-201ENST00000516258 113 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 SNORA27.4-201ENST00000516650 95 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.78□□□□□ -1.96
KDM1AO60341 AL512605.2-201ENST00000592972 256 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AL162424.1-201ENST00000602325 221 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AC025754.2-201ENST00000606491 432 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 AC013412.1-201ENST00000610687 192 ntBASIC2.78□□□□□ -1.96
KDM1AO60341 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.78□□□□□ -1.96
KDM1AO60341 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.77□□□□□ -1.97
KDM1AO60341 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.77□□□□□ -1.97
KDM1AO60341 AC008134.1-201ENST00000420943 193 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.77□□□□□ -1.97
KDM1AO60341 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.77□□□□□ -1.97
KDM1AO60341 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.77□□□□□ -1.97
KDM1AO60341 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 RNU1-104P-201ENST00000517280 175 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 NDUFA5P6-201ENST00000542110 379 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.77□□□□□ -1.97
KDM1AO60341 ELOCP29-201ENST00000588193 334 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KDM1AO60341 AL355596.1-201ENST00000565399 3996 ntBASIC2.77□□□□□ -1.97
KDM1AO60341 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KDM1AO60341 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KDM1AO60341 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KDM1AO60341 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.76□□□□□ -1.97
KDM1AO60341 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
KDM1AO60341 Y_RNA.65-201ENST00000362846 100 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 RNY1-201ENST00000364228 113 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 RNU6-740P-201ENST00000364734 105 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 SNORA67.1-201ENST00000364749 141 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms