Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNORD11B-201ENST00000607707 90 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 AC006001.4-201ENST00000622243 395 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 AL359697.1-201ENST00000624879 587 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 AC068205.3-201ENST00000636385 468 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 AC099654.5-201ENST00000636479 350 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 AL669831.3-213ENST00000636676 183 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 MTND5P16-201ENST00000460269 1703 ntBASIC1.48□□□□□ -2.17
LCMT2O60294 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LCMT2O60294 SNORA33-201ENST00000363664 130 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-281P-201ENST00000384212 103 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-793P-201ENST00000384233 104 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-296P-201ENST00000384608 107 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 MIR190B-201ENST00000401119 79 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 RNU6-370P-201ENST00000411008 104 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 AC245047.4-201ENST00000433189 144 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.47□□□□□ -2.17
LCMT2O60294 snoU13.9-201ENST00000458927 103 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 U8.22-201ENST00000459141 133 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 AC114982.1-201ENST00000469402 321 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 HMGN1P13-201ENST00000505795 138 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 AC105029.1-201ENST00000520250 669 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.47□□□□□ -2.17
LCMT2O60294 MIR338-201ENST00000636369 67 ntBASIC1.47□□□□□ -2.17
LCMT2O60294 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LCMT2O60294 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LCMT2O60294 RNU6-414P-201ENST00000363705 104 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 RNU6-280P-201ENST00000364145 104 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 RNU1-96P-201ENST00000364163 162 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 RNU1-139P-201ENST00000391307 165 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 Y_RNA.646-201ENST00000410980 101 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.46□□□□□ -2.18
LCMT2O60294 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.46□□□□□ -2.18
LCMT2O60294 USP9YP16-201ENST00000430287 407 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 HMGN2P34-201ENST00000437647 269 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 USP9YP23-201ENST00000455085 407 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 Y_RNA.635-201ENST00000459041 101 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.46□□□□□ -2.18
LCMT2O60294 RNU6-1114P-201ENST00000516022 107 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 APOOP3-201ENST00000536787 586 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 AC125232.2-201ENST00000592457 143 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 PISRT1.1-201ENST00000616930 107 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 snoZ196.1-201ENST00000625269 89 ntBASIC1.46□□□□□ -2.18
LCMT2O60294 Y_RNA.67-201ENST00000362870 100 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 Y_RNA.179-201ENST00000363844 90 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 RNU6-310P-201ENST00000384655 107 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 EIF1P2-201ENST00000428233 350 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.45□□□□□ -2.18
LCMT2O60294 AC093303.1-201ENST00000514549 295 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AC025647.1-201ENST00000517879 253 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
LCMT2O60294 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.45□□□□□ -2.18
LCMT2O60294 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AC005730.3-201ENST00000583067 366 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 AL353149.1-201ENST00000610667 244 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.45□□□□□ -2.18
LCMT2O60294 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCMT2O60294 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCMT2O60294 SNORA72.1-201ENST00000363485 129 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 Y_RNA.142-201ENST00000363491 102 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU6-1188P-201ENST00000363795 107 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 Y_RNA.287-201ENST00000364853 94 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 Y_RNA.364-201ENST00000365532 101 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.44□□□□□ -2.18
LCMT2O60294 Y_RNA.557-201ENST00000384680 107 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU6-700P-201ENST00000391043 107 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR1267-201ENST00000408723 78 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU6-1001P-201ENST00000411265 100 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.44□□□□□ -2.18
LCMT2O60294 RNU7-87P-201ENST00000459343 62 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNU6-221P-201ENST00000459541 99 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 RNA5SP437-201ENST00000517249 129 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 AC093023.1-201ENST00000547375 507 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 AC010999.1-201ENST00000611856 324 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR1244-1-201ENST00000612829 85 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 AC092794.2-201ENST00000620933 563 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR1244-3-201ENST00000635744 85 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR1244-2-201ENST00000636449 85 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 MIR1244-4-202ENST00000636813 85 ntBASIC1.44□□□□□ -2.18
LCMT2O60294 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCMT2O60294 MTND5P35-201ENST00000557537 1720 ntBASIC1.43□□□□□ -2.18
LCMT2O60294 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCMT2O60294 RNA5SP361-201ENST00000362686 118 ntBASIC1.43□□□□□ -2.18
LCMT2O60294 snoU2-30.2-201ENST00000362805 70 ntBASIC1.43□□□□□ -2.18
LCMT2O60294 U3.8-201ENST00000363675 217 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms