Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.42□□□□□ -1.86
SMARCA5O60264 AC074133.1-201ENST00000515696 183 ntBASIC3.42□□□□□ -1.86
SMARCA5O60264 MIR3145-201ENST00000580727 82 ntBASIC3.42□□□□□ -1.86
SMARCA5O60264 AC023043.3-201ENST00000593113 385 ntBASIC3.42□□□□□ -1.86
SMARCA5O60264 AC005176.2-201ENST00000596933 147 ntBASIC3.42□□□□□ -1.86
SMARCA5O60264 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SMARCA5O60264 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.42□□□□□ -1.86
SMARCA5O60264 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMARCA5O60264 Y_RNA.101-201ENST00000363154 102 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 RNU6-137P-201ENST00000363680 108 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 SNORA25B-201ENST00000365507 128 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 RN7SKP123-201ENST00000410732 291 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 RNU5E-9P-201ENST00000411164 104 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 OOSP1P1-201ENST00000423265 274 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 RPL23AP83-201ENST00000434984 473 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 AC025750.2-201ENST00000442609 450 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCA5O60264 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCA5O60264 MIR4658-201ENST00000584344 65 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 AL356575.1-201ENST00000603008 283 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 AC073349.3-201ENST00000617616 186 ntBASIC3.41□□□□□ -1.86
SMARCA5O60264 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCA5O60264 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCA5O60264 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.86
SMARCA5O60264 RNU1-23P-201ENST00000363361 144 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 RNU6-944P-201ENST00000364023 107 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 MIR4506-201ENST00000584693 77 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 AC022441.3-201ENST00000605737 136 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 AC006386.2-201ENST00000624491 75 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 AC012005.1-201ENST00000624575 75 ntBASIC3.4□□□□□ -1.87
SMARCA5O60264 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.39□□□□□ -1.87
SMARCA5O60264 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMARCA5O60264 RNU4-80P-201ENST00000363200 141 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 MIR320B2-201ENST00000408479 138 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.39□□□□□ -1.87
SMARCA5O60264 AC024067.1-201ENST00000426199 223 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.39□□□□□ -1.87
SMARCA5O60264 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.39□□□□□ -1.87
SMARCA5O60264 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.39□□□□□ -1.87
SMARCA5O60264 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.39□□□□□ -1.87
SMARCA5O60264 AP002001.1-203ENST00000534002 267 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 CYCSP26-201ENST00000534107 320 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 NDUFA5P6-201ENST00000542110 379 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.39□□□□□ -1.87
SMARCA5O60264 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.39□□□□□ -1.87
SMARCA5O60264 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.39□□□□□ -1.87
SMARCA5O60264 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 AC010999.1-201ENST00000611856 324 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
SMARCA5O60264 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMARCA5O60264 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMARCA5O60264 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SMARCA5O60264 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMARCA5O60264 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCA5O60264 ZNF204P-201ENST00000416749 2397 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 RNU6-653P-201ENST00000363074 106 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 SNORD50.2-201ENST00000365465 70 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 Y_RNA.435-201ENST00000384095 112 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 AL138827.1-201ENST00000402666 306 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 RNU6-1199P-201ENST00000411249 104 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 AL390729.2-201ENST00000416137 156 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCA5O60264 AC087499.2-201ENST00000432861 149 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SMARCA5O60264 HSPE1P18-201ENST00000517602 280 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.38□□□□□ -1.87
SMARCA5O60264 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.38□□□□□ -1.87
SMARCA5O60264 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.38□□□□□ -1.87
SMARCA5O60264 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 snoU18.1-201ENST00000629629 71 ntBASIC3.38□□□□□ -1.87
SMARCA5O60264 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCA5O60264 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SMARCA5O60264 RNU6-1130P-201ENST00000365434 107 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 RNU6-81P-201ENST00000365608 104 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 MIR887-201ENST00000401258 79 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 Y_RNA.595-201ENST00000410403 105 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 ELOCP21-201ENST00000412558 336 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 RPL23AP36-201ENST00000413895 458 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCA5O60264 AC005042.3-201ENST00000453230 174 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 HMGB3P3-201ENST00000510526 400 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 RNU6-191P-201ENST00000516295 94 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 RNA5SP54-201ENST00000516951 92 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.37□□□□□ -1.87
SMARCA5O60264 EIF4BP1-201ENST00000554881 351 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 AC233702.2-202ENST00000562547 291 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 AC091932.3-201ENST00000624223 323 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCA5O60264 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCA5O60264 AP006437.1-201ENST00000641440 3685 ntBASIC3.37□□□□□ -1.87
SMARCA5O60264 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.37□□□□□ -1.87
SMARCA5O60264 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMARCA5O60264 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SMARCA5O60264 MTND5P35-201ENST00000557537 1720 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 RNU6-211P-201ENST00000384047 107 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SMARCA5O60264 SUMO1P4-201ENST00000429430 302 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms