Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSX4O60224 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
SSX4O60224 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SSX4O60224 Y_RNA.5-201ENST00000362334 102 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RNU4-42P-201ENST00000364738 142 ntBASIC1.87□□□□□ -2.11
SSX4O60224 Y_RNA.431-201ENST00000384086 102 ntBASIC1.87□□□□□ -2.11
SSX4O60224 Y_RNA.496-201ENST00000384444 101 ntBASIC1.87□□□□□ -2.11
SSX4O60224 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
SSX4O60224 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
SSX4O60224 MIR1185-2-201ENST00000408687 86 ntBASIC1.87□□□□□ -2.11
SSX4O60224 UQCRBP2-201ENST00000447827 297 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RNU6-221P-201ENST00000459541 99 ntBASIC1.87□□□□□ -2.11
SSX4O60224 AC011406.1-201ENST00000512440 370 ntBASIC1.87□□□□□ -2.11
SSX4O60224 Y_RNA.661-201ENST00000516003 99 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RNU6-976P-201ENST00000516086 111 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
SSX4O60224 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
SSX4O60224 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.87□□□□□ -2.11
SSX4O60224 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
SSX4O60224 AC006001.4-201ENST00000622243 395 ntBASIC1.87□□□□□ -2.11
SSX4O60224 AC138305.3-201ENST00000624988 240 ntBASIC1.87□□□□□ -2.11
SSX4O60224 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.87□□□□□ -2.11
SSX4O60224 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SSX4O60224 Y_RNA.197-201ENST00000364004 102 ntBASIC1.86□□□□□ -2.11
SSX4O60224 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
SSX4O60224 ELOCP21-201ENST00000412558 336 ntBASIC1.86□□□□□ -2.11
SSX4O60224 CHEK2P4-201ENST00000450340 246 ntBASIC1.86□□□□□ -2.11
SSX4O60224 PCNPP5-201ENST00000452246 481 ntBASIC1.86□□□□□ -2.11
SSX4O60224 RNU6-1170P-201ENST00000515974 106 ntBASIC1.86□□□□□ -2.11
SSX4O60224 CYCSP23-201ENST00000519781 313 ntBASIC1.86□□□□□ -2.11
SSX4O60224 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
SSX4O60224 AL080274.1-201ENST00000605565 220 ntBASIC1.86□□□□□ -2.11
SSX4O60224 U2.1-201ENST00000618978 145 ntBASIC1.86□□□□□ -2.11
SSX4O60224 AC091925.1-201ENST00000623204 462 ntBASIC1.86□□□□□ -2.11
SSX4O60224 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
SSX4O60224 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SSX4O60224 AC008555.8-201ENST00000623602 2168 ntBASIC1.86□□□□□ -2.11
SSX4O60224 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
SSX4O60224 RNU6-797P-201ENST00000363101 109 ntBASIC1.85□□□□□ -2.11
SSX4O60224 Y_RNA.252-201ENST00000364556 101 ntBASIC1.85□□□□□ -2.11
SSX4O60224 SNORD12B-201ENST00000410433 91 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AC016909.1-201ENST00000415916 166 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AL158823.1-201ENST00000418441 478 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
SSX4O60224 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
SSX4O60224 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AC025647.1-201ENST00000517879 253 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.85□□□□□ -2.11
SSX4O60224 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.15-201ENST00000611544 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.16-201ENST00000613119 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.12-201ENST00000613778 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.20-201ENST00000613956 192 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.9-201ENST00000615427 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.11-201ENST00000616345 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.2-201ENST00000616535 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.3-201ENST00000617785 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.19-201ENST00000618602 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
SSX4O60224 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
SSX4O60224 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
SSX4O60224 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
SSX4O60224 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SSX4O60224 AC006026.1-201ENST00000444025 1803 ntBASIC1.84□□□□□ -2.11
SSX4O60224 RNA5SP99-201ENST00000364020 114 ntBASIC1.84□□□□□ -2.11
SSX4O60224 Y_RNA.535-201ENST00000384612 99 ntBASIC1.84□□□□□ -2.11
SSX4O60224 MIR628-201ENST00000385229 95 ntBASIC1.84□□□□□ -2.11
SSX4O60224 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SSX4O60224 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AL117342.1-201ENST00000404861 406 ntBASIC1.84□□□□□ -2.11
SSX4O60224 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AC007677.1-201ENST00000445757 515 ntBASIC1.84□□□□□ -2.11
SSX4O60224 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.84□□□□□ -2.11
SSX4O60224 AC074133.1-201ENST00000515696 183 ntBASIC1.84□□□□□ -2.11
SSX4O60224 SNORA40.9-201ENST00000515895 93 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
SSX4O60224 AC018448.1-201ENST00000552843 316 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
SSX4O60224 MIR5094-201ENST00000578766 85 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AC092447.9-201ENST00000603395 144 ntBASIC1.84□□□□□ -2.11
SSX4O60224 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
SSX4O60224 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SSX4O60224 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SSX4O60224 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX4O60224 ZNF72P-201ENST00000425869 1908 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
SSX4O60224 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX4O60224 MIR369-201ENST00000362155 70 ntBASIC1.83□□□□□ -2.12
SSX4O60224 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
SSX4O60224 RNU6-482P-201ENST00000391068 107 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AC018865.2-201ENST00000423631 129 ntBASIC1.83□□□□□ -2.12
SSX4O60224 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSX4O60224 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX4O60224 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
SSX4O60224 RNU6-911P-201ENST00000516523 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms