Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
SSNA1O43805 AC106754.1-201ENST00000562632 1513 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 RNU6-727P-201ENST00000363592 107 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 MIR891A-201ENST00000401237 79 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.1□□□□□ -2.39
SSNA1O43805 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.1□□□□□ -2.39
SSNA1O43805 RNU7-180P-201ENST00000459240 63 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 MTND2P14-201ENST00000482139 351 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.1□□□□□ -2.39
SSNA1O43805 CCDC34P1-201ENST00000507441 517 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.1□□□□□ -2.39
SSNA1O43805 RNU7-41P-201ENST00000515917 61 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 SNORA14.1-201ENST00000516113 141 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 RNU6-341P-201ENST00000516973 96 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 RNU7-172P-201ENST00000517125 64 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 AP002004.2-201ENST00000531656 154 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.1□□□□□ -2.39
SSNA1O43805 MTATP6P3-201ENST00000581686 676 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 AC091178.2-201ENST00000584401 117 ntBASIC0.1□□□□□ -2.39
SSNA1O43805 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.09□□□□□ -2.39
SSNA1O43805 RNU6-181P-201ENST00000363225 107 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 RNU6-1214P-201ENST00000363650 109 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 SNORD111-201ENST00000408139 94 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.09□□□□□ -2.4
SSNA1O43805 BX295541.1-201ENST00000417774 250 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 AC133104.1-201ENST00000429100 218 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.09□□□□□ -2.4
SSNA1O43805 AL033528.1-201ENST00000453780 140 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 SNORA25.14-201ENST00000516481 132 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 RNU6-445P-201ENST00000516949 107 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.09□□□□□ -2.4
SSNA1O43805 HULC.1-201ENST00000612720 240 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 AC006435.5-201ENST00000624486 112 ntBASIC0.09□□□□□ -2.4
SSNA1O43805 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.09□□□□□ -2.4
SSNA1O43805 MTND4P12-201ENST00000498999 1377 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNU6-1329P-201ENST00000365664 107 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNU6-784P-201ENST00000384330 106 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNU6-517P-201ENST00000384362 110 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 MTCO3P19-201ENST00000415864 321 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 ZNF885P-201ENST00000420174 1098 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 Z99497.1-201ENST00000421282 135 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 AC107401.1-201ENST00000503426 685 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 RNU6-1291P-201ENST00000516591 104 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 SNORA18.6-201ENST00000516792 115 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 MIR4300-201ENST00000581016 96 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 AL512605.2-201ENST00000592972 256 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 AC008133.2-201ENST00000624540 351 ntBASIC0.08□□□□□ -2.4
SSNA1O43805 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
SSNA1O43805 RNU6-833P-201ENST00000363486 107 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 SNORD115-8-201ENST00000363856 82 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 SNORD115-38-201ENST00000365037 82 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 MIR562-201ENST00000384894 95 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 MIR521-1-201ENST00000384902 87 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 RNU6-325P-201ENST00000411132 105 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 MTCYBP8-201ENST00000422855 651 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
SSNA1O43805 MTND4P18-201ENST00000447010 465 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.07□□□□□ -2.4
SSNA1O43805 AC023442.1-201ENST00000531247 422 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 RPL21P9-201ENST00000556149 474 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 MIR3945-201ENST00000581853 98 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 AP000942.3-201ENST00000603702 160 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 uc_338.34-201ENST00000617467 174 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 AC243829.3-201ENST00000622177 108 ntBASIC0.07□□□□□ -2.4
SSNA1O43805 RNU6-873P-201ENST00000363833 107 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 RNU6-297P-201ENST00000384636 107 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.06□□□□□ -2.4
SSNA1O43805 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.06□□□□□ -2.4
SSNA1O43805 Z98949.2-201ENST00000440996 144 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 AL356010.1-201ENST00000456364 102 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 MRPS36P3-201ENST00000519284 130 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.06□□□□□ -2.4
SSNA1O43805 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.06□□□□□ -2.4
SSNA1O43805 AC011458.1-201ENST00000604034 617 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 AC008536.2-201ENST00000607284 349 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 MIR8076-201ENST00000611401 83 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 AC016597.2-201ENST00000613256 341 ntBASIC0.06□□□□□ -2.4
SSNA1O43805 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SSNA1O43805 MIR96-201ENST00000362288 78 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 RNU4-41P-201ENST00000364426 143 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 MIR573-201ENST00000384964 99 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 PIGPP3-201ENST00000425307 415 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.05□□□□□ -2.4
SSNA1O43805 RPS20P10-201ENST00000451209 253 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.05□□□□□ -2.4
SSNA1O43805 snoU13.23-201ENST00000458863 104 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AC091179.3-201ENST00000474761 144 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AC010598.1-201ENST00000510378 103 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 RNU6-1096P-201ENST00000517089 102 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AC087854.1-201ENST00000519706 414 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.05□□□□□ -2.4
SSNA1O43805 AC015712.3-201ENST00000559380 164 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 AC010620.1-201ENST00000601088 1102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms