Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB2O43679 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB2O43679 MIR449C-201ENST00000516047 92 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNU1-117P-201ENST00000517041 158 ntBASIC2.26□□□□□ -2.05
LDB2O43679 AC022616.8-201ENST00000533569 253 ntBASIC2.26□□□□□ -2.05
LDB2O43679 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB2O43679 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.26□□□□□ -2.05
LDB2O43679 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
LDB2O43679 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
LDB2O43679 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 SNORA38-201ENST00000363946 132 ntBASIC2.25□□□□□ -2.05
LDB2O43679 Y_RNA.376-201ENST00000365638 108 ntBASIC2.25□□□□□ -2.05
LDB2O43679 Y_RNA.396-201ENST00000383949 103 ntBASIC2.25□□□□□ -2.05
LDB2O43679 Y_RNA.401-201ENST00000383965 117 ntBASIC2.25□□□□□ -2.05
LDB2O43679 RNU6-546P-201ENST00000383991 107 ntBASIC2.25□□□□□ -2.05
LDB2O43679 SNORA67.2-201ENST00000384300 149 ntBASIC2.25□□□□□ -2.05
LDB2O43679 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
LDB2O43679 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.25□□□□□ -2.05
LDB2O43679 RNU2-20P-201ENST00000410425 191 ntBASIC2.25□□□□□ -2.05
LDB2O43679 RNU2-32P-201ENST00000411193 191 ntBASIC2.25□□□□□ -2.05
LDB2O43679 AL390729.2-201ENST00000416137 156 ntBASIC2.25□□□□□ -2.05
LDB2O43679 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB2O43679 RAB28P5-201ENST00000427490 651 ntBASIC2.25□□□□□ -2.05
LDB2O43679 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.25□□□□□ -2.05
LDB2O43679 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
LDB2O43679 RNU1-41P-201ENST00000516161 162 ntBASIC2.25□□□□□ -2.05
LDB2O43679 Y_RNA.668-201ENST00000516233 93 ntBASIC2.25□□□□□ -2.05
LDB2O43679 RNU1-48P-201ENST00000516400 162 ntBASIC2.25□□□□□ -2.05
LDB2O43679 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB2O43679 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
LDB2O43679 AC005176.2-201ENST00000596933 147 ntBASIC2.25□□□□□ -2.05
LDB2O43679 AL355297.2-201ENST00000604792 129 ntBASIC2.25□□□□□ -2.05
LDB2O43679 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB2O43679 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LDB2O43679 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB2O43679 MTND5P6-201ENST00000422338 1798 ntBASIC2.24□□□□□ -2.05
LDB2O43679 MIR410-201ENST00000362222 80 ntBASIC2.24□□□□□ -2.05
LDB2O43679 RNU1-23P-201ENST00000363361 144 ntBASIC2.24□□□□□ -2.05
LDB2O43679 SNORD87-201ENST00000364849 89 ntBASIC2.24□□□□□ -2.05
LDB2O43679 RNU6-1264P-201ENST00000383891 107 ntBASIC2.24□□□□□ -2.05
LDB2O43679 RNU6-1026P-201ENST00000384465 108 ntBASIC2.24□□□□□ -2.05
LDB2O43679 Y_RNA.570-201ENST00000384750 101 ntBASIC2.24□□□□□ -2.05
LDB2O43679 MIR586-201ENST00000385035 97 ntBASIC2.24□□□□□ -2.05
LDB2O43679 Y_RNA.581-201ENST00000391017 97 ntBASIC2.24□□□□□ -2.05
LDB2O43679 MIR300-201ENST00000401138 83 ntBASIC2.24□□□□□ -2.05
LDB2O43679 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
LDB2O43679 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
LDB2O43679 AC096920.1-201ENST00000423991 241 ntBASIC2.24□□□□□ -2.05
LDB2O43679 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
LDB2O43679 NDUFB4P10-201ENST00000452541 359 ntBASIC2.24□□□□□ -2.05
LDB2O43679 RNU7-14P-201ENST00000459331 62 ntBASIC2.24□□□□□ -2.05
LDB2O43679 AC098869.1-201ENST00000481627 292 ntBASIC2.24□□□□□ -2.05
LDB2O43679 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
LDB2O43679 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.24□□□□□ -2.05
LDB2O43679 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.24□□□□□ -2.05
LDB2O43679 AC009831.4-201ENST00000620744 325 ntBASIC2.24□□□□□ -2.05
LDB2O43679 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB2O43679 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB2O43679 Y_RNA.84-201ENST00000363011 104 ntBASIC2.23□□□□□ -2.05
LDB2O43679 snoU2_19.2-201ENST00000363024 80 ntBASIC2.23□□□□□ -2.05
LDB2O43679 SNORD113-8-201ENST00000363497 74 ntBASIC2.23□□□□□ -2.05
LDB2O43679 U3.8-201ENST00000363675 217 ntBASIC2.23□□□□□ -2.05
LDB2O43679 SNORA67.1-201ENST00000364749 141 ntBASIC2.23□□□□□ -2.05
LDB2O43679 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
LDB2O43679 Y_RNA.288-201ENST00000364854 92 ntBASIC2.23□□□□□ -2.05
LDB2O43679 RNU6-1310P-201ENST00000384153 107 ntBASIC2.23□□□□□ -2.05
LDB2O43679 Y_RNA.518-201ENST00000384552 113 ntBASIC2.23□□□□□ -2.05
LDB2O43679 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
LDB2O43679 MT-TW-201ENST00000387382 68 ntBASIC2.23□□□□□ -2.05
LDB2O43679 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.23□□□□□ -2.05
LDB2O43679 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.23□□□□□ -2.05
LDB2O43679 HMGN2P9-201ENST00000476875 229 ntBASIC2.23□□□□□ -2.05
LDB2O43679 TRBVB-201ENST00000477100 408 ntBASIC2.23□□□□□ -2.05
LDB2O43679 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.23□□□□□ -2.05
LDB2O43679 ATP5EP1-201ENST00000510257 156 ntBASIC2.23□□□□□ -2.05
LDB2O43679 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
LDB2O43679 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.23□□□□□ -2.05
LDB2O43679 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.23□□□□□ -2.05
LDB2O43679 AC011373.1-201ENST00000607270 237 ntBASIC2.23□□□□□ -2.05
LDB2O43679 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
LDB2O43679 MIR3674-201ENST00000636576 68 ntBASIC2.23□□□□□ -2.05
LDB2O43679 SNORD81.1-201ENST00000363064 77 ntBASIC2.22□□□□□ -2.05
LDB2O43679 RNU6-1305P-201ENST00000364353 104 ntBASIC2.22□□□□□ -2.05
LDB2O43679 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
LDB2O43679 SNORA72.2-201ENST00000365028 127 ntBASIC2.22□□□□□ -2.05
LDB2O43679 Y_RNA.483-201ENST00000384380 101 ntBASIC2.22□□□□□ -2.05
LDB2O43679 RNU6-505P-201ENST00000384427 107 ntBASIC2.22□□□□□ -2.05
LDB2O43679 MIR215-201ENST00000384858 110 ntBASIC2.22□□□□□ -2.05
LDB2O43679 MIR561-201ENST00000385216 97 ntBASIC2.22□□□□□ -2.05
LDB2O43679 MIR1283-1-201ENST00000408494 87 ntBASIC2.22□□□□□ -2.05
LDB2O43679 Y_RNA.618-201ENST00000410949 107 ntBASIC2.22□□□□□ -2.05
LDB2O43679 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.22□□□□□ -2.05
LDB2O43679 TOMM22P2-201ENST00000430735 237 ntBASIC2.22□□□□□ -2.05
LDB2O43679 AL121890.1-201ENST00000435457 205 ntBASIC2.22□□□□□ -2.05
LDB2O43679 SEPT14P8-201ENST00000508026 178 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms