Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AP003327.1-201ENST00000529684 127 ntBASIC4.18□□□□□ -1.74
SPTLC1O15269 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.18□□□□□ -1.74
SPTLC1O15269 AC007012.1-201ENST00000567192 175 ntBASIC4.18□□□□□ -1.74
SPTLC1O15269 MIR3117-201ENST00000584034 78 ntBASIC4.18□□□□□ -1.74
SPTLC1O15269 AC009831.4-201ENST00000620744 325 ntBASIC4.18□□□□□ -1.74
SPTLC1O15269 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SPTLC1O15269 AL136360.1-201ENST00000503377 1900 ntBASIC4.18□□□□□ -1.74
SPTLC1O15269 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
SPTLC1O15269 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SPTLC1O15269 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SPTLC1O15269 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPTLC1O15269 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 SNORA14A-201ENST00000364773 135 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 Y_RNA.549-201ENST00000384657 102 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 SNORD12C-201ENST00000386307 89 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTLC1O15269 SNORD11-201ENST00000459124 84 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 SNORA4.4-201ENST00000515921 135 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 RNU7-149P-201ENST00000516739 59 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 CYCSP30-201ENST00000546447 172 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.17□□□□□ -1.74
SPTLC1O15269 AC087499.8-201ENST00000578406 226 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 MIR5195-201ENST00000583555 115 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTLC1O15269 AC091564.4-201ENST00000533934 2194 ntBASIC4.17□□□□□ -1.74
SPTLC1O15269 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
SPTLC1O15269 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTLC1O15269 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTLC1O15269 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SPTLC1O15269 AP003122.5-201ENST00000527668 3766 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTLC1O15269 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SPTLC1O15269 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SPTLC1O15269 Y_RNA.85-201ENST00000363014 111 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 Y_RNA.163-201ENST00000363702 113 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 Y_RNA.796-201ENST00000364268 102 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 RNA5SP173-201ENST00000364857 136 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 Y_RNA.799-201ENST00000364992 102 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 Y_RNA.528-201ENST00000384575 108 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 U8.11-201ENST00000384699 133 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 RN7SKP156-201ENST00000410308 342 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 MTATP6P21-201ENST00000440681 189 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 RPS12P18-201ENST00000442381 270 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 AL021397.1-201ENST00000451806 248 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 U8.18-201ENST00000459285 133 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 RNU6-638P-201ENST00000516582 104 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 RNU6-365P-201ENST00000517113 106 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 MIR4474-201ENST00000579189 78 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 AC062037.1-201ENST00000605302 128 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.16□□□□□ -1.74
SPTLC1O15269 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTLC1O15269 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SPTLC1O15269 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTLC1O15269 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SPTLC1O15269 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SPTLC1O15269 RNU6-1138P-201ENST00000365359 106 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 RNU6-546P-201ENST00000383991 107 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 SNORA5A-201ENST00000384111 134 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 RNU6-1275P-201ENST00000391087 107 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 RNA5SP127-201ENST00000411051 133 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 RNU1-95P-201ENST00000516357 160 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 RNU1-128P-201ENST00000516704 160 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.15□□□□□ -1.75
SPTLC1O15269 AC110741.2-201ENST00000605278 268 ntBASIC4.15□□□□□ -1.75
SPTLC1O15269 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.75
SPTLC1O15269 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPTLC1O15269 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTLC1O15269 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SPTLC1O15269 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTLC1O15269 RNA5SP97-201ENST00000365006 84 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 MIR199A2-201ENST00000385289 110 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 MIR891A-201ENST00000401237 79 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 MIR1302-5-201ENST00000408164 150 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 Y_RNA.621-201ENST00000411065 96 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTLC1O15269 NDUFB1P1-201ENST00000435191 180 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 HMGN2P7-201ENST00000456186 273 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 RNU1-104P-201ENST00000517280 175 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTLC1O15269 AC090115.4-201ENST00000609970 188 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 MIR1248-201ENST00000629190 106 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 AC110079.1-202ENST00000635213 138 ntBASIC4.14□□□□□ -1.75
SPTLC1O15269 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTLC1O15269 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTLC1O15269 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SPTLC1O15269 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SPTLC1O15269 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SPTLC1O15269 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPTLC1O15269 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTLC1O15269 RNU1-72P-201ENST00000362976 153 ntBASIC4.13□□□□□ -1.75
SPTLC1O15269 RNU6-573P-201ENST00000383938 106 ntBASIC4.13□□□□□ -1.75
SPTLC1O15269 MIR562-201ENST00000384894 95 ntBASIC4.13□□□□□ -1.75
SPTLC1O15269 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SPTLC1O15269 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
SPTLC1O15269 SNORA3.3-201ENST00000408712 125 ntBASIC4.13□□□□□ -1.75
SPTLC1O15269 AL139247.1-201ENST00000422768 325 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms