Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NPHP1O15259 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.12□□□□□ -2.07
NPHP1O15259 AC025465.3-201ENST00000510570 311 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 AC093303.1-201ENST00000514549 295 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 RNU6-1146P-201ENST00000516282 102 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 AC009229.3-201ENST00000608056 282 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 MIR8074-201ENST00000615081 81 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 AL391987.6-201ENST00000305671 199 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 RNU6-222P-201ENST00000362438 107 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 SNORA33-201ENST00000363664 130 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 U3.8-201ENST00000363675 217 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 Y_RNA.166-201ENST00000363730 102 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 Y_RNA.179-201ENST00000363844 90 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP1O15259 RPL31P63-201ENST00000422565 375 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 HSPE1P9-201ENST00000440046 311 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 MTND3P10-201ENST00000450967 341 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 RNU6-1114P-201ENST00000516022 107 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP1O15259 AC005668.1-201ENST00000571142 476 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 MIR5695-201ENST00000579717 85 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 MIR3618-201ENST00000580330 88 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.11□□□□□ -2.07
NPHP1O15259 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.11□□□□□ -2.07
NPHP1O15259 Y_RNA.106-201ENST00000363189 100 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 Y_RNA.508-201ENST00000384502 114 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 RNU6-417P-201ENST00000384712 107 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 RNU6-876P-201ENST00000391295 104 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 EBAG9P1-201ENST00000418955 543 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 USP9YP16-201ENST00000430287 407 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 USP9YP23-201ENST00000455085 407 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 RPL7P42-201ENST00000481005 679 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 RNU1-92P-201ENST00000517017 135 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 AC105029.1-201ENST00000520250 669 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 MZT1P2-201ENST00000604387 248 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 AC010999.1-201ENST00000611856 324 ntBASIC2.1□□□□□ -2.07
NPHP1O15259 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.09□□□□□ -2.07
NPHP1O15259 RNU1-42P-201ENST00000364033 160 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.09□□□□□ -2.07
NPHP1O15259 MIR934-201ENST00000401241 83 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 RNU2-7P-201ENST00000410794 178 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 PDCL2P1-201ENST00000419302 352 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.09□□□□□ -2.07
NPHP1O15259 AC069257.2-201ENST00000441819 155 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AC116353.2-201ENST00000505332 712 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AC103851.1-201ENST00000506833 274 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 CBX3P4-201ENST00000538909 354 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AL121579.1-201ENST00000555129 305 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AC016925.2-201ENST00000605108 242 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 uc_338.5-201ENST00000611839 155 ntBASIC2.09□□□□□ -2.07
NPHP1O15259 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.09□□□□□ -2.07
NPHP1O15259 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NPHP1O15259 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.09□□□□□ -2.08
NPHP1O15259 MTND5P16-201ENST00000460269 1703 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NPHP1O15259 SNORA72.2-201ENST00000365028 127 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 RNU6-1240P-201ENST00000365155 104 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 Y_RNA.404-201ENST00000383978 102 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 RNU6-281P-201ENST00000384212 103 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 MIR515-2-201ENST00000384883 83 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 MIR515-1-201ENST00000384884 83 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 RNU6-360P-201ENST00000390944 104 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 MIR190B-201ENST00000401119 79 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 MIR1253-201ENST00000408273 105 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 AC005908.1-201ENST00000468701 347 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 RPL26P26-201ENST00000480251 434 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 HMGN1P13-201ENST00000505795 138 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 Y_RNA.691-201ENST00000516611 103 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.08□□□□□ -2.08
NPHP1O15259 RNY1P16-201ENST00000363063 111 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 Y_RNA.327-201ENST00000365201 102 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 RNU6-338P-201ENST00000383888 105 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 RNU6-700P-201ENST00000391043 107 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 AL353997.1-201ENST00000432936 108 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.07□□□□□ -2.08
NPHP1O15259 RNA5SP481-201ENST00000516814 122 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.07□□□□□ -2.08
NPHP1O15259 AC099654.5-201ENST00000636479 350 ntBASIC2.07□□□□□ -2.08
NPHP1O15259 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NPHP1O15259 MTND5P35-201ENST00000557537 1720 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 RNU6-874P-201ENST00000362390 105 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 RNU6-414P-201ENST00000363705 104 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 SNORA67.6-201ENST00000391093 99 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 MTCYBP10-201ENST00000424905 650 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 RBMX2P4-201ENST00000441256 376 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 RPL36AP21-201ENST00000490372 323 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.06□□□□□ -2.08
NPHP1O15259 Y_RNA.683-201ENST00000516508 93 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 AC093023.1-201ENST00000547375 507 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP1O15259 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP1O15259 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 AC125232.2-201ENST00000592457 143 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 AL645939.4-201ENST00000604495 135 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 AC022306.2-201ENST00000617563 647 ntBASIC2.06□□□□□ -2.08
NPHP1O15259 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms