Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MTND3P21-201ENST00000433774 331 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AL606517.2-201ENST00000442855 241 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.36□□□□□ -2.19
DDX39AO00148 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AC022432.1-201ENST00000595739 310 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.36□□□□□ -2.19
DDX39AO00148 AC048344.4-201ENST00000619744 527 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AC009033.1-201ENST00000624279 431 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.36□□□□□ -2.19
DDX39AO00148 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.36□□□□□ -2.19
DDX39AO00148 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 RNU6-727P-201ENST00000363592 107 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 Y_RNA.194-201ENST00000363985 102 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 Y_RNA.415-201ENST00000384012 112 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RNU6-1031P-201ENST00000384773 107 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RNU6-1186P-201ENST00000410429 97 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.35□□□□□ -2.19
DDX39AO00148 RPL30P16-201ENST00000419341 429 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 AC245047.3-201ENST00000429428 127 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 MTATP6P13-201ENST00000438531 667 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RPL30P10-201ENST00000488148 337 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.35□□□□□ -2.19
DDX39AO00148 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.35□□□□□ -2.19
DDX39AO00148 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 AC109635.3-201ENST00000529536 185 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 TPRKBP2-201ENST00000565969 475 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 MIR3672-201ENST00000584290 82 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
DDX39AO00148 RNU6-793P-201ENST00000384233 104 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 RNU6-17P-201ENST00000384245 107 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 RNU6-18P-201ENST00000384527 107 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 Y_RNA.517-201ENST00000384551 106 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 AC091179.3-201ENST00000474761 144 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 MZT1P2-201ENST00000604387 248 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 AC022217.4-201ENST00000604389 163 ntBASIC1.34□□□□□ -2.19
DDX39AO00148 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
DDX39AO00148 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
DDX39AO00148 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 RNU6-1090P-201ENST00000364065 94 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
DDX39AO00148 RNU6-159P-201ENST00000391080 106 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 RNU6-373P-201ENST00000411247 98 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 AC005002.2-201ENST00000438228 269 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 AC093534.1-201ENST00000504977 132 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 SUMO2P16-201ENST00000519475 264 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 AC134698.4-201ENST00000523451 826 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.33□□□□□ -2.2
DDX39AO00148 AC009248.2-201ENST00000619826 254 ntBASIC1.33□□□□□ -2.2
DDX39AO00148 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
DDX39AO00148 SNORD116-11-201ENST00000383882 92 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.32□□□□□ -2.2
DDX39AO00148 PGBD4P5-201ENST00000445958 426 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.32□□□□□ -2.2
DDX39AO00148 COX6CP14-201ENST00000469580 174 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.32□□□□□ -2.2
DDX39AO00148 SNORA31.10-201ENST00000516482 106 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 APOOP3-201ENST00000536787 586 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 UBL5P4-201ENST00000562584 236 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 U6.73-201ENST00000619194 103 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 MIR8054-201ENST00000620877 86 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 AC099654.5-201ENST00000636479 350 ntBASIC1.32□□□□□ -2.2
DDX39AO00148 Y_RNA.179-201ENST00000363844 90 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 RNU4-75P-201ENST00000364621 146 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 RNU6-306P-201ENST00000384617 107 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 MIR181A1-201ENST00000385026 110 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 MRPL42P3-201ENST00000401492 326 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 AC243428.1-201ENST00000421099 264 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.31□□□□□ -2.2
DDX39AO00148 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.31□□□□□ -2.2
DDX39AO00148 RNU7-175P-201ENST00000515915 61 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 RNU7-99P-201ENST00000516271 62 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.31□□□□□ -2.2
DDX39AO00148 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.31□□□□□ -2.2
DDX39AO00148 AC004584.2-201ENST00000570407 410 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 MIR5696-201ENST00000578474 85 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 MIR3664-201ENST00000579074 99 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 AF250324.2-201ENST00000608299 610 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.31□□□□□ -2.2
DDX39AO00148 AC024614.3-201ENST00000637860 256 ntBASIC1.31□□□□□ -2.2
DDX39AO00148 Y_RNA.41-201ENST00000362646 102 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 RNU1-22P-201ENST00000363334 158 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 RNU4-24P-201ENST00000364565 139 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 Y_RNA.402-201ENST00000383972 102 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.3□□□□□ -2.2
DDX39AO00148 RNU7-94P-201ENST00000459576 63 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 AC093303.1-201ENST00000514549 295 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms