Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 U8.13-201ENST00000390842 128 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNA5SP504-201ENST00000410676 117 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 AC245047.4-201ENST00000433189 144 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNU7-34P-201ENST00000459394 64 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNU6-221P-201ENST00000459541 99 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 MTND4P17-201ENST00000470444 350 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC188H7C350 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC188H7C350 AC093303.1-201ENST00000514549 295 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNA5SP437-201ENST00000517249 129 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 AP000942.3-201ENST00000603702 160 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC188H7C350 MIR8063-201ENST00000621930 81 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 MTND5P35-201ENST00000557537 1720 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC188H7C350 RNU6-879P-201ENST00000364328 108 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 RNU6-331P-201ENST00000384724 107 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 SNORA75.4-201ENST00000391278 119 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 MIR190B-201ENST00000401119 79 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 AL117342.1-201ENST00000404861 406 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 UQCRBP2-201ENST00000447827 297 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC188H7C350 SCARNA16.2-201ENST00000516520 172 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 AC025647.1-201ENST00000517879 253 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC188H7C350 AL121579.1-201ENST00000555129 305 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 MZT1P2-201ENST00000604387 248 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 AC005014.2-201ENST00000607795 599 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 TPTEP1-208ENST00000636884 213 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC188H7C350 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
CCDC188H7C350 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC188H7C350 Y_RNA.4-201ENST00000362333 112 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 Y_RNA.338-201ENST00000365320 114 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 MIR583-201ENST00000384846 75 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 Y_RNA.595-201ENST00000410403 105 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AC073910.1-201ENST00000445047 438 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 UBE2V1P7-201ENST00000446395 340 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 RNU1-142P-201ENST00000516682 145 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC188H7C350 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AC004584.2-201ENST00000570407 410 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AC090617.3-201ENST00000573670 475 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC188H7C350 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
CCDC188H7C350 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 Y_RNA.279-201ENST00000364763 95 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC188H7C350 RNA5SP467-201ENST00000391274 118 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 RNU6-1186P-201ENST00000410429 97 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 RNU6-1001P-201ENST00000411265 100 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 snoU13.27-201ENST00000459278 104 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC027575.1-201ENST00000481064 460 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC022868.1-201ENST00000517767 391 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC027419.1-201ENST00000522976 328 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC188H7C350 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC188H7C350 HSBP1P1-201ENST00000555205 166 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 MIR4709-201ENST00000577272 72 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC188H7C350 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC188H7C350 AL359075.3-201ENST00000613288 217 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AC092794.2-201ENST00000620933 563 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 AL669831.3-213ENST00000636676 183 ntBASIC1.65□□□□□ -2.15
CCDC188H7C350 Y_RNA.339-201ENST00000365325 102 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 Y_RNA.364-201ENST00000365532 101 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 RNU6-360P-201ENST00000390944 104 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 MIR1185-2-201ENST00000408687 86 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 RNU6-370P-201ENST00000411008 104 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 AC016909.1-201ENST00000415916 166 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 NDUFB4P10-201ENST00000452541 359 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC188H7C350 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 AC024995.1-201ENST00000523014 93 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 AL137100.2-201ENST00000555786 315 ntBASIC1.64□□□□□ -2.15
CCDC188H7C350 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC188H7C350 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CCDC188H7C350 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 Y_RNA.166-201ENST00000363730 102 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 Y_RNA.287-201ENST00000364853 94 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 Y_RNA.404-201ENST00000383978 102 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
CCDC188H7C350 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC188H7C350 TOMM22P2-201ENST00000430735 237 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 AC098614.3-201ENST00000438957 440 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 MTND4P18-201ENST00000447010 465 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 PRDX4P1-201ENST00000507189 574 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 RNU6-1213P-201ENST00000517075 94 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 RNU6-264P-201ENST00000517134 104 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms