Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 MIR3672-201ENST00000584290 82 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC025811.1-201ENST00000604312 472 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 RNU6-199P-201ENST00000362954 107 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.184-201ENST00000363884 108 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 SNORD116-1-201ENST00000384335 95 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 RNU6-910P-201ENST00000390844 107 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 STAG3L5P-204ENST00000443759 179 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 MRPS10P1-201ENST00000448483 130 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 RPS27P22-201ENST00000478056 241 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 AC010598.1-201ENST00000510378 103 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 RNU7-175P-201ENST00000515915 61 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 MIR4778-201ENST00000577635 80 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 MIR4303-201ENST00000581299 66 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 MIR3660-201ENST00000584845 100 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 AC092954.2-201ENST00000609103 430 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 AC010999.1-201ENST00000611856 324 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 AC022079.1-201ENST00000621546 602 ntBASIC0.81□□□□□ -2.28
SMKR1H3BMG3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 RNY3P3-201ENST00000363816 102 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 MIR10B-201ENST00000385011 110 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 SNORA26.9-201ENST00000391322 122 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC243428.1-201ENST00000421099 264 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 MTATP6P13-201ENST00000438531 667 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC010469.2-201ENST00000496412 480 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC093852.1-201ENST00000503587 266 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC023157.2-201ENST00000540596 141 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 BNIP3P22-201ENST00000593399 556 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 AC073413.2-201ENST00000604332 360 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 MIR6079-201ENST00000635807 62 ntBASIC0.8□□□□□ -2.28
SMKR1H3BMG3 RNU6-451P-201ENST00000362921 107 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RNU6-457P-201ENST00000363999 107 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 SNORD116-11-201ENST00000383882 92 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 SNORA22-201ENST00000383907 134 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 SNORA22C-201ENST00000384614 134 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 SNORD12-201ENST00000391002 90 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RNU6-332P-201ENST00000391193 108 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RNU2-16P-201ENST00000410712 136 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC245047.7-201ENST00000440265 293 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 MTND1P1-201ENST00000445453 368 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RPS29P28-201ENST00000446439 141 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RN7SKP210-201ENST00000459176 261 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AP000870.1-201ENST00000472927 406 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RNA5SP168-201ENST00000516642 112 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC091144.1-201ENST00000519573 138 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC027419.1-201ENST00000522976 328 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AP000889.1-201ENST00000530968 660 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AL020996.3-201ENST00000606617 222 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.79□□□□□ -2.28
SMKR1H3BMG3 MIR1321-201ENST00000637766 79 ntBASIC0.79□□□□□ -2.28
SMKR1H3BMG3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SMKR1H3BMG3 RNU6-596P-201ENST00000365395 98 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 RNU6-424P-201ENST00000384367 105 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 SNORD41-201ENST00000386967 70 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AL451046.2-201ENST00000403074 277 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 MTCO3P19-201ENST00000415864 321 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.78□□□□□ -2.28
SMKR1H3BMG3 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 RNU6-107P-201ENST00000516643 102 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AL590705.4-201ENST00000532209 134 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 MIR4273-201ENST00000582824 84 ntBASIC0.78□□□□□ -2.28
SMKR1H3BMG3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 MIR562-201ENST00000384894 95 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 USMG5P1-201ENST00000425964 177 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 AC002429.1-201ENST00000437672 148 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 MTND1P29-201ENST00000448112 647 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 AC097462.1-201ENST00000514125 324 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 SNORD79.1-201ENST00000516069 84 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 RNU7-172P-201ENST00000517125 64 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 RPL21P9-201ENST00000556149 474 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 AL357312.1-201ENST00000603879 298 ntBASIC0.77□□□□□ -2.29
SMKR1H3BMG3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.77□□□□□ -2.29
SMKR1H3BMG3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.77□□□□□ -2.29
SMKR1H3BMG3 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 SNORA2.2-201ENST00000365473 135 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms