Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 MIR10B-201ENST00000385011 110 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AC016909.1-201ENST00000415916 166 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 CST2P1-201ENST00000425770 87 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 USMG5P1-201ENST00000425964 177 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AC107399.1-201ENST00000451226 265 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 RPL7P42-201ENST00000481005 679 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AL163540.1-201ENST00000485382 386 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AC025647.1-201ENST00000517879 253 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.72-201ENST00000362894 103 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-767P-201ENST00000384132 107 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-793P-201ENST00000384233 104 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-601P-201ENST00000384540 107 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-331P-201ENST00000384724 107 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-876P-201ENST00000391295 104 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RPL37P10-201ENST00000412884 288 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AL353997.1-201ENST00000432936 108 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 SUB1P3-201ENST00000564581 315 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AC005668.1-201ENST00000571142 476 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AC005014.2-201ENST00000607795 599 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 AC009229.3-201ENST00000608056 282 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.42□□□□□ -2.18
NPIPA2E9PIF3 MTND5P16-201ENST00000460269 1703 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 SNORA63D-201ENST00000364359 132 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.490-201ENST00000384413 102 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.505-201ENST00000384489 102 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RN7SKP51-201ENST00000410781 304 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 MTND3P10-201ENST00000450967 341 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RNU7-87P-201ENST00000459343 62 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RNU6-221P-201ENST00000459541 99 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AC082651.2-201ENST00000496833 166 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 RNU6-107P-201ENST00000516643 102 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AC100812.1-201ENST00000607622 580 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AC010999.1-201ENST00000611856 324 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 AC100821.1-201ENST00000523153 2479 ntBASIC1.41□□□□□ -2.18
NPIPA2E9PIF3 Y_RNA.88-201ENST00000363029 99 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 SNORA4.2-201ENST00000365313 147 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 RNA5SP323-201ENST00000391094 133 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 MIR1185-2-201ENST00000408687 86 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 USP9YP16-201ENST00000430287 407 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 USP9YP23-201ENST00000455085 407 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 uc_338.5-201ENST00000611839 155 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
NPIPA2E9PIF3 RNY1P16-201ENST00000363063 111 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 U3.8-201ENST00000363675 217 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 SNORA72.2-201ENST00000365028 127 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 Y_RNA.404-201ENST00000383978 102 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 RNU6-281P-201ENST00000384212 103 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 Y_RNA.482-201ENST00000384377 111 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 MT-TL1-201ENST00000386347 75 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 MIR190B-201ENST00000401119 79 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 AC008134.1-201ENST00000420943 193 ntBASIC1.39□□□□□ -2.19
NPIPA2E9PIF3 MTND1P2-201ENST00000430604 821 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms