Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Y_RNA.557-201ENST00000384680 107 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 MIR190B-201ENST00000401119 79 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 MIR548F4-201ENST00000408515 105 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 Y_RNA.592-201ENST00000410274 109 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU6-101P-201ENST00000410323 104 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.69□□□□□ -2.14
SRRM4A7MD48 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.69□□□□□ -2.14
SRRM4A7MD48 AC244636.1-201ENST00000421152 228 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 DPH3P2-201ENST00000422618 250 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RPL23AP7-203ENST00000449021 469 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 NDUFB4P10-201ENST00000452541 359 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU6-717P-201ENST00000459076 104 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU7-87P-201ENST00000459343 62 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 U8.20-201ENST00000459445 131 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU6-498P-201ENST00000459468 107 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU6-1146P-201ENST00000516282 102 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 Y_RNA.721-201ENST00000517207 102 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
SRRM4A7MD48 DEFB131C-201ENST00000528817 165 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AP002770.2-201ENST00000543613 532 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AC124312.5-201ENST00000604451 268 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 U2.1-201ENST00000618978 145 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 AC008873.1-201ENST00000625051 138 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-222P-201ENST00000362438 107 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-545P-201ENST00000362681 104 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-1305P-201ENST00000364353 104 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 Y_RNA.358-201ENST00000365491 99 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 SNORD14.1-201ENST00000365609 90 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-975P-201ENST00000384296 105 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 MIR597-201ENST00000384968 97 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 MIR628-201ENST00000385229 95 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-159P-201ENST00000391080 106 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.68□□□□□ -2.14
SRRM4A7MD48 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
SRRM4A7MD48 AL021397.1-201ENST00000451806 248 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AC010655.3-201ENST00000478818 450 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 RNU6-856P-201ENST00000516959 98 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AC022616.4-201ENST00000522985 181 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.68□□□□□ -2.14
SRRM4A7MD48 AC040926.1-201ENST00000530195 238 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AC027288.2-201ENST00000553028 243 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AC008269.2-201ENST00000561915 1105 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 IGHVIII-44-202ENST00000636235 289 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.68□□□□□ -2.14
SRRM4A7MD48 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRRM4A7MD48 AL159152.1-201ENST00000635019 2587 ntBASIC1.68□□□□□ -2.14
SRRM4A7MD48 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 RNA5SP276-201ENST00000362580 94 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 SNORD114-6-201ENST00000364393 72 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 RNU6-708P-201ENST00000384217 107 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 RNU6-574P-201ENST00000384265 107 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 MIR487A-201ENST00000385009 80 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 MIR568-201ENST00000385036 95 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SRRM4A7MD48 AL023284.1-201ENST00000403956 276 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 U3.40-201ENST00000408706 208 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 RNA5SP501-201ENST00000410990 112 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC114482.1-201ENST00000418010 247 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC008134.1-201ENST00000420943 193 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 MTCYBP9-201ENST00000431021 303 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 U8.22-201ENST00000459141 133 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC025033.1-201ENST00000463883 194 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC010531.2-201ENST00000465012 153 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 MRPS35P2-201ENST00000508242 191 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 SNORA25.14-201ENST00000516481 132 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 RNU6-911P-201ENST00000516523 104 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC090617.3-201ENST00000573670 475 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 MIR4298-201ENST00000584380 73 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AP000942.4-201ENST00000604811 241 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.67□□□□□ -2.14
SRRM4A7MD48 AC068205.3-201ENST00000636385 468 ntBASIC1.67□□□□□ -2.14
SRRM4A7MD48 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SRRM4A7MD48 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SRRM4A7MD48 MIR449A-201ENST00000362113 91 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNA5SP138-201ENST00000365098 114 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU6-793P-201ENST00000384233 104 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU6-463P-201ENST00000384340 107 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 MIR515-2-201ENST00000384883 83 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 MIR515-1-201ENST00000384884 83 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SRRM4A7MD48 EBAG9P1-201ENST00000418955 543 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 USP9YP16-201ENST00000430287 407 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.66□□□□□ -2.14
SRRM4A7MD48 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.66□□□□□ -2.14
SRRM4A7MD48 USP9YP23-201ENST00000455085 407 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNA5SP57-201ENST00000459463 123 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 HMGN2P9-201ENST00000476875 229 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms