Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR8054-201ENST00000620877 86 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 SNORD33-201ENST00000362761 85 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MTCYBP4-201ENST00000401524 249 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 RPL21P111-201ENST00000418453 477 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AL353193.1-201ENST00000421444 268 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AL358934.1-201ENST00000432346 324 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 UBE2V1P8-201ENST00000437166 265 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 SNRPEP8-201ENST00000442866 260 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MTND4P18-201ENST00000447010 465 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 SNRPGP7-201ENST00000469016 106 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MTCO2P30-201ENST00000503662 364 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 RNU6-566P-201ENST00000516790 107 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 SNORA31.17-201ENST00000516953 127 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AC016256.1-201ENST00000547971 354 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MIR3937-201ENST00000580135 106 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MIR4636-201ENST00000582271 80 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 MIR4653-201ENST00000585107 83 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AL162424.1-201ENST00000602325 221 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AL353149.1-201ENST00000610667 244 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 PCGEM1.1-201ENST00000613431 131 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 AC245060.5-201ENST00000610778 3293 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.56□□□□□ -2.32
COL6A6A6NMZ7 RNU6-212P-201ENST00000362642 104 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 MIR194-1-201ENST00000384892 85 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 MIR549A-201ENST00000385268 96 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 MIR300-201ENST00000401138 83 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP100-201ENST00000410903 110 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP59-201ENST00000410922 110 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 ZNF885P-201ENST00000420174 1098 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC123900.1-201ENST00000420390 96 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 HMGN1P12-201ENST00000499125 195 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC107401.1-201ENST00000503426 685 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC091435.1-201ENST00000505442 584 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6-344P-201ENST00000516635 111 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC007684.1-201ENST00000609671 477 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.123-201ENST00000363338 102 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1164P-201ENST00000364428 107 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 SNORD1A-201ENST00000364968 72 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6-282P-201ENST00000365357 103 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6-248P-201ENST00000410720 107 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC012306.1-201ENST00000423267 114 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 USP9YP28-201ENST00000435142 589 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 SCARNA18-201ENST00000459004 134 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU7-94P-201ENST00000459576 63 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RPL23AP75-201ENST00000491601 451 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1281P-201ENST00000516223 105 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 DEFB131C-201ENST00000528817 165 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC092954.2-201ENST00000609103 430 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AC009033.1-201ENST00000624279 431 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 AL391516.1-201ENST00000554380 2449 ntBASIC0.55□□□□□ -2.32
COL6A6A6NMZ7 RNU1-76P-201ENST00000362903 159 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNY4P14-201ENST00000363656 96 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 CALM2P3-201ENST00000400429 449 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 MIR1912-201ENST00000410389 80 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 MTND3P23-201ENST00000431980 347 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 ERLEC1P1-201ENST00000433806 578 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU7-57P-201ENST00000459540 60 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RPS26P45-201ENST00000471748 340 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 HMGN1P13-201ENST00000505795 138 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU7-30P-201ENST00000516835 62 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC233702.2-202ENST00000562547 291 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AL513534.2-201ENST00000603836 250 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC019193.3-201ENST00000609144 554 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC099654.5-201ENST00000636479 350 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms