Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 U6.70-201ENST00000620287 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 MIRLET7C-201ENST00000362160 84 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 RNU6-564P-201ENST00000410983 104 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AL117339.3-201ENST00000418733 162 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AL360271.2-201ENST00000447710 161 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 RNU7-43P-201ENST00000516554 64 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AL133153.1-201ENST00000557756 303 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AC090517.1-201ENST00000569307 266 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 MIR4677-201ENST00000584153 80 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AL138889.2-201ENST00000603883 242 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AL445264.1-201ENST00000621719 171 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 AC093726.3-201ENST00000637588 150 ntBASIC-1.72□□□□□ -2.68
LINC01549A6NIU2 RNU6-343P-201ENST00000364709 104 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 SNORD14.1-201ENST00000365609 90 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 RNU6-47P-201ENST00000383866 107 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 MT-TN-201ENST00000387400 73 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 PCNPP5-201ENST00000452246 481 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 RNA5SP169-201ENST00000517268 117 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 AC104383.1-201ENST00000530297 370 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 AC134878.1-201ENST00000619901 243 ntBASIC-1.73□□□□□ -2.69
LINC01549A6NIU2 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 RNU6-364P-201ENST00000384387 107 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 MIR1298-201ENST00000408783 112 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 AL133396.1-201ENST00000432048 687 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 AC002542.1-201ENST00000440683 193 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 RNU6-914P-201ENST00000516749 109 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 ZNF971P-201ENST00000562068 1249 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 MIR378D2-201ENST00000580636 98 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 AC008752.3-201ENST00000588113 712 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 MTND4P9-201ENST00000507819 1346 ntBASIC-1.74□□□□□ -2.69
LINC01549A6NIU2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 RNU6-396P-201ENST00000365369 105 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 SNORA26.3-201ENST00000391119 136 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 MIR891A-201ENST00000401237 79 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 AC013470.1-201ENST00000453438 462 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 MTCO3P9-201ENST00000506989 781 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 AC093303.1-201ENST00000514549 295 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 AC105029.1-201ENST00000520250 669 ntBASIC-1.75□□□□□ -2.69
LINC01549A6NIU2 RNU6-562P-201ENST00000362731 107 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 RNU6-1284P-201ENST00000363701 100 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 SNORA67.2-201ENST00000384300 149 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 RNU6-378P-201ENST00000384324 107 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 MTCO3P40-201ENST00000392516 676 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 MIR876-201ENST00000401147 81 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 AC046134.1-201ENST00000514454 666 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 RNU7-99P-201ENST00000516271 62 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 AC087883.1-201ENST00000551882 391 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 AC090617.3-201ENST00000573670 475 ntBASIC-1.76□□□□□ -2.69
LINC01549A6NIU2 SNORD45.3-201ENST00000363836 72 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 RNY3P5-201ENST00000384127 102 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 MIR217-201ENST00000384817 110 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 MIR19A-201ENST00000384878 82 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 RNA5SP47-201ENST00000517230 109 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 MIR5706-201ENST00000579841 80 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 SNORD92-201ENST00000585078 85 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 AL355297.3-201ENST00000604082 446 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 MIR6738-201ENST00000619620 64 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 AC022960.3-201ENST00000619794 441 ntBASIC-1.77□□□□□ -2.69
LINC01549A6NIU2 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 RNU6-891P-201ENST00000384280 111 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AC098592.1-201ENST00000419352 333 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AC244670.1-201ENST00000436879 112 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 MTATP6P26-201ENST00000445926 662 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 RNU6-274P-201ENST00000459566 107 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AL596327.1-201ENST00000603629 213 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AC009994.1-201ENST00000606889 253 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AP001033.2-201ENST00000609701 1003 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 MTND5P42-201ENST00000637720 498 ntBASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.78□□□□□ -2.69
LINC01549A6NIU2 AC005592.1-201ENST00000566527 1640 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 RNU6-701P-201ENST00000384059 107 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 MIR452-201ENST00000385020 85 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 AC006600.1-201ENST00000572529 153 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 AC008521.1-201ENST00000587471 187 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 AL139022.2-201ENST00000606934 443 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 RMST_7.1-201ENST00000621935 268 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 MIR4251-201ENST00000635819 61 ntBASIC-1.79□□□□□ -2.7
LINC01549A6NIU2 MIR215-201ENST00000384858 110 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 MIR1305-201ENST00000408300 86 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 SCARNA1-201ENST00000517138 166 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AC018448.1-201ENST00000552843 316 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 FGF7P1-201ENST00000582820 288 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AC133794.1-201ENST00000602731 914 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 AC005332.6-201ENST00000613178 446 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 uc_338.19-201ENST00000616808 99 ntBASIC-1.8□□□□□ -2.7
LINC01549A6NIU2 ZNF204P-201ENST00000416749 2397 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms