Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AP003072.1-201ENST00000531740 145 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 MIR3136-201ENST00000583498 78 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC092447.9-201ENST00000603395 144 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC006157.1-201ENST00000611750 366 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC130454.1-201ENST00000622948 401 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC091925.1-201ENST00000623204 462 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC091812.1-201ENST00000432235 1948 ntBASIC1.78□□□□□ -2.13
TRIM49BA6NDI0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNU4-56P-201ENST00000364700 142 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 SNORD87-201ENST00000364849 89 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNU6-318P-201ENST00000384283 103 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 MIR548P-201ENST00000408336 84 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 MCFD2P1-201ENST00000417812 300 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 MTND4P19-201ENST00000446659 478 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNA5SP458-201ENST00000516188 119 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNU2-44P-201ENST00000516795 194 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.711-201ENST00000516993 102 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RNU6-58P-201ENST00000517143 103 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 RN7SKP295-201ENST00000517264 153 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 SUB1P3-201ENST00000564581 315 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 MIR3923-201ENST00000579521 83 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 AL356157.2-201ENST00000605122 111 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 AC011476.5-201ENST00000615594 130 ntBASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM49BA6NDI0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 RNU6-23P-201ENST00000363283 107 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.645-201ENST00000391229 102 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 AK6P2-201ENST00000549020 471 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 MZT1P2-201ENST00000604387 248 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 RMST_6.1-201ENST00000611980 203 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 MIR4272-201ENST00000635924 64 ntBASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM49BA6NDI0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 RNU6-545P-201ENST00000362681 104 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 RNU6-490P-201ENST00000362985 107 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 RNU6-926P-201ENST00000384075 107 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.592-201ENST00000410274 109 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC113618.1-201ENST00000416747 285 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC004386.2-201ENST00000441858 148 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AL035666.1-201ENST00000446195 348 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC091179.3-201ENST00000474761 144 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC010469.2-201ENST00000496412 480 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 RNU6-1170P-201ENST00000515974 106 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.706-201ENST00000516933 99 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 RNU1-117P-201ENST00000517041 158 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC022868.1-201ENST00000517767 391 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 EIF4A1P12-201ENST00000551910 141 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC005520.5-201ENST00000613926 164 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 AC137590.2-201ENST00000619709 240 ntBASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
TRIM49BA6NDI0 MIR340-201ENST00000362125 95 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 U3.9-201ENST00000363823 204 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 SNORD115-32-201ENST00000364079 82 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.252-201ENST00000364556 101 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.577-201ENST00000384794 101 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RNU6-700P-201ENST00000391043 107 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 MTCYBP10-201ENST00000424905 650 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 MTND4P28-201ENST00000426217 387 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 EIF1P2-201ENST00000428233 350 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 USP9YP16-201ENST00000430287 407 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 USP9YP23-201ENST00000455085 407 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RN7SKP210-201ENST00000459176 261 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 AL163540.1-201ENST00000485382 386 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RNU7-175P-201ENST00000515915 61 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RNU6-264P-201ENST00000517134 104 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 AP002001.1-203ENST00000534002 267 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 AC093023.1-201ENST00000547375 507 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 RRN3P3-201ENST00000549207 578 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 HSBP1P1-201ENST00000555205 166 ntBASIC1.74□□□□□ -2.13
TRIM49BA6NDI0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms