Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.26-201ENST00000362539 101 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.64-201ENST00000362845 102 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 VTRNA1-1-201ENST00000363120 99 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-806P-201ENST00000365147 105 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-937P-201ENST00000384325 106 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-1235P-201ENST00000384559 107 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNA5SP475-201ENST00000410568 110 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 AL357134.1-201ENST00000445848 426 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-498P-201ENST00000459468 107 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-221P-201ENST00000459541 99 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 AC010531.2-201ENST00000465012 153 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 SNORA4.4-201ENST00000515921 135 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-107P-201ENST00000516643 102 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 AC022441.3-201ENST00000605737 136 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 AC004467.1-201ENST00000615678 330 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 MIR376A1-201ENST00000616574 68 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 MIR8062-201ENST00000621515 85 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 snoZ196.1-201ENST00000625269 89 ntBASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.24□□□□□ -2.05
TCRBV7S3A2A0A539 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 MIR1262-201ENST00000408276 93 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 AL049873.1-201ENST00000480540 376 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 RNU2-12P-201ENST00000517216 168 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 AP003733.2-201ENST00000529409 171 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 AC025754.2-201ENST00000606491 432 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 AL136360.1-201ENST00000503377 1900 ntBASIC2.23□□□□□ -2.05
TCRBV7S3A2A0A539 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.101-201ENST00000363154 102 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.222-201ENST00000364264 102 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-454P-201ENST00000364292 107 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-418P-201ENST00000384035 107 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-463P-201ENST00000384340 107 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.581-201ENST00000391017 97 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU2-20P-201ENST00000410425 191 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-1199P-201ENST00000411249 104 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RPL19P1-201ENST00000411635 428 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 SEPT14P8-201ENST00000508026 178 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 AL161670.1-201ENST00000554348 137 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 AC026271.5-201ENST00000577873 130 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 MIR3684-201ENST00000579779 74 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 AC091932.3-201ENST00000624223 323 ntBASIC2.22□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-238P-201ENST00000363313 106 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.144-201ENST00000363521 113 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-1175P-201ENST00000365200 107 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.556-201ENST00000384677 113 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 RNU2-54P-201ENST00000410299 190 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 AC016717.1-201ENST00000448918 286 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 RNU1-131P-201ENST00000458943 161 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-856P-201ENST00000516959 98 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 MIR3162-201ENST00000581818 82 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD113-5-201ENST00000607261 78 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 AC011373.1-201ENST00000607270 237 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TCRBV7S3A2A0A539 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 snoU2_19.2-201ENST00000363024 80 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD113-8-201ENST00000363497 74 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.243-201ENST00000364481 109 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 SNORA72.2-201ENST00000365028 127 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD14D-201ENST00000384390 87 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-713P-201ENST00000384761 107 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 MIR1302-3-201ENST00000408128 138 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RPL23AP36-201ENST00000413895 458 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RPL21P38-201ENST00000418090 167 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RPL23AP7-203ENST00000449021 469 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC005042.3-201ENST00000453230 174 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC098869.1-201ENST00000481627 292 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-496P-201ENST00000516145 99 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC025647.1-201ENST00000517879 253 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC005828.6-201ENST00000606610 232 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms