Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 FRG2DP-202ENST00000566967 323 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 AL031667.3-201ENST00000620124 655 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 AC013437.2-201ENST00000639587 677 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 MTND5P17-201ENST00000418405 1603 ntBASIC-0.13□□□□□ -2.43
TRAV5A0A0B4J249 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RNA5SP257-201ENST00000363023 116 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 SNORD113.3-201ENST00000364630 78 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 MIR520F-201ENST00000384824 87 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 MIR518A1-201ENST00000385068 85 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 SNORD70.1-201ENST00000391007 85 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 SNORD83.1-201ENST00000411362 77 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RPS26P42-201ENST00000413485 326 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 MTCO2P21-201ENST00000419780 677 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RNA5SP227-201ENST00000516184 113 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 MIR4438-201ENST00000585271 93 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 AC068790.2-201ENST00000602601 557 ntBASIC-0.14□□□□□ -2.43
TRAV5A0A0B4J249 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU4-92P-201ENST00000363783 136 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU6-434P-201ENST00000384376 107 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 MIR320B2-201ENST00000408479 138 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 EPS15P1-201ENST00000448836 336 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 TRBVB-201ENST00000477100 408 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU7-41P-201ENST00000515917 61 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU2-69P-201ENST00000516061 100 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RN7SKP164-201ENST00000516138 266 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 RNU7-28P-201ENST00000516759 62 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 AC005771.1-201ENST00000585581 349 ntBASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.15□□□□□ -2.43
TRAV5A0A0B4J249 MIRLET7C-201ENST00000362160 84 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-137P-201ENST00000363680 108 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-169P-201ENST00000365336 107 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 SNORA2B-201ENST00000384583 137 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 SNORA40.8-201ENST00000411034 126 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 HSFY5P-201ENST00000453726 309 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 ELOCP24-201ENST00000456370 334 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 HMGN2P26-201ENST00000463169 339 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RPL23AP54-201ENST00000495129 419 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-612P-201ENST00000516909 102 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AC104383.1-201ENST00000530297 370 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AC023157.2-201ENST00000540596 141 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 AC027288.2-201ENST00000553028 243 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 MIR3612-201ENST00000579753 87 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-85P-201ENST00000605989 107 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 SCARNA4-201ENST00000629045 128 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 ZNF204P-201ENST00000416749 2397 ntBASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.16□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP325-201ENST00000363756 130 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-654P-201ENST00000364373 107 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP517-201ENST00000364724 117 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-157P-201ENST00000383957 107 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MIR520C-201ENST00000385005 87 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MIR520G-201ENST00000385064 90 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MIR520H-201ENST00000385126 88 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MIR891A-201ENST00000401237 79 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AC007215.1-201ENST00000464893 276 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-344P-201ENST00000516635 111 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AC069113.1-201ENST00000517763 267 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AC093027.1-201ENST00000546698 429 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AC104695.3-201ENST00000604052 296 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 RMST_3.1-201ENST00000611651 109 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AL008636.1-201ENST00000625038 1018 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 AL138960.2-201ENST00000625145 535 ntBASIC-0.17□□□□□ -2.44
TRAV5A0A0B4J249 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 SNORA1B-201ENST00000362535 133 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms