Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 ZNF885P-201ENST00000420174 1098 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AC069271.1-201ENST00000445577 156 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 RPL17P19-201ENST00000489069 552 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-782P-201ENST00000516852 104 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-58P-201ENST00000517143 103 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AC068587.4-201ENST00000533893 186 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 FRG2DP-202ENST00000566967 323 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 MTND4LP25-201ENST00000570218 163 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AC131235.4-201ENST00000609288 620 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 MTND4P4-201ENST00000439033 1366 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNY4P24-201ENST00000362735 96 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 SNORD56.2-201ENST00000363242 71 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-934P-201ENST00000365154 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 SNORD14.1-201ENST00000365609 90 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR452-201ENST00000385020 85 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-298P-201ENST00000390888 96 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 MTND1P4-201ENST00000435196 415 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 PCNPP5-201ENST00000452246 481 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 MTND1P12-201ENST00000455231 147 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-848P-201ENST00000515948 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-617P-201ENST00000516147 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-473P-201ENST00000516164 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR2115-201ENST00000516657 100 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 RNA5SP454-201ENST00000517231 127 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 AC009712.1-201ENST00000564938 316 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 AC104260.1-201ENST00000616660 539 ntBASIC-0.67□□□□□ -2.52
TRAV13-2A0A0B4J235 SNORA1B-201ENST00000362535 133 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR760-201ENST00000390220 80 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU2-8P-201ENST00000410727 190 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AC007327.1-201ENST00000447461 264 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AC114811.1-201ENST00000507207 168 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU7-43P-201ENST00000516554 64 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-430P-201ENST00000517078 107 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-685P-201ENST00000517088 95 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-201P-201ENST00000517100 61 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AC023442.1-201ENST00000531247 422 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR4438-201ENST00000585271 93 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AC012433.1-201ENST00000588916 398 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AC025449.1-201ENST00000603896 529 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AL592221.1-201ENST00000605266 382 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 AL109933.3-201ENST00000619095 188 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.68□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-580P-201ENST00000365159 107 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-224P-201ENST00000384055 107 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR562-201ENST00000384894 95 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AL049545.1-201ENST00000401856 572 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 RPS26P42-201ENST00000413485 326 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 USP9YP21-201ENST00000420603 432 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AC015818.7-201ENST00000428754 109 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AC087499.7-201ENST00000441958 109 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 SNORD126-201ENST00000459475 77 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 RPS29P27-201ENST00000463711 170 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-334P-201ENST00000517072 102 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AP002004.2-201ENST00000531656 154 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR4771-2-201ENST00000577758 74 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AC090897.1-201ENST00000580909 226 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR4771-1-201ENST00000582617 74 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR4676-201ENST00000583078 72 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AL139022.2-201ENST00000606934 443 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 AC027279.3-201ENST00000625055 122 ntBASIC-0.69□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-723P-201ENST00000383973 107 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 AL355143.1-201ENST00000407101 841 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 MTND4P3-201ENST00000417829 541 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 Z98949.2-201ENST00000440996 144 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-63P-201ENST00000516690 95 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-341P-201ENST00000516973 96 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR3118-1-201ENST00000581787 76 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 MIR548AZ-201ENST00000616567 95 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.7□□□□□ -2.52
TRAV13-2A0A0B4J235 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-61P-201ENST00000365528 109 ntBASIC-0.71□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms