Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.03□□□□□ -1.92
U3KQE9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
U3KQE9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.03□□□□□ -1.92
U3KQE9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
U3KQE9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
U3KQE9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
U3KQE9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.02□□□□□ -1.93
U3KQE9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 Y_RNA.49-201ENST00000362714 112 ntBASIC3.02□□□□□ -1.93
U3KQE9 Y_RNA.163-201ENST00000363702 113 ntBASIC3.02□□□□□ -1.93
U3KQE9 Y_RNA.328-201ENST00000365208 113 ntBASIC3.02□□□□□ -1.93
U3KQE9 MIR1253-201ENST00000408273 105 ntBASIC3.02□□□□□ -1.93
U3KQE9 MIR1263-201ENST00000408324 86 ntBASIC3.02□□□□□ -1.93
U3KQE9 AC025750.2-201ENST00000442609 450 ntBASIC3.02□□□□□ -1.93
U3KQE9 HMGN2P18-201ENST00000450680 270 ntBASIC3.02□□□□□ -1.93
U3KQE9 AL133162.1-201ENST00000463228 453 ntBASIC3.02□□□□□ -1.93
U3KQE9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.02□□□□□ -1.93
U3KQE9 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
U3KQE9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.02□□□□□ -1.93
U3KQE9 IGKV1-22-201ENST00000524313 326 ntBASIC3.02□□□□□ -1.93
U3KQE9 MIR3129-201ENST00000581095 76 ntBASIC3.02□□□□□ -1.93
U3KQE9 MIR3939-201ENST00000582614 106 ntBASIC3.02□□□□□ -1.93
U3KQE9 MIR492-201ENST00000638676 116 ntBASIC3.02□□□□□ -1.93
U3KQE9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
U3KQE9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.02□□□□□ -1.93
U3KQE9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.01□□□□□ -1.93
U3KQE9 RNU1-96P-201ENST00000364163 162 ntBASIC3.01□□□□□ -1.93
U3KQE9 RNY4P30-201ENST00000410216 95 ntBASIC3.01□□□□□ -1.93
U3KQE9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
U3KQE9 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
U3KQE9 AL356095.1-201ENST00000417217 199 ntBASIC3.01□□□□□ -1.93
U3KQE9 CALM2P4-201ENST00000430810 426 ntBASIC3.01□□□□□ -1.93
U3KQE9 RPS15AP28-201ENST00000435088 386 ntBASIC3.01□□□□□ -1.93
U3KQE9 AL500522.2-201ENST00000448562 343 ntBASIC3.01□□□□□ -1.93
U3KQE9 AC006463.2-201ENST00000473326 348 ntBASIC3.01□□□□□ -1.93
U3KQE9 MRPS17P9-201ENST00000511924 393 ntBASIC3.01□□□□□ -1.93
U3KQE9 SNORA70.14-201ENST00000516205 110 ntBASIC3.01□□□□□ -1.93
U3KQE9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.01□□□□□ -1.93
U3KQE9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.01□□□□□ -1.93
U3KQE9 RNU6-94P-201ENST00000607728 107 ntBASIC3.01□□□□□ -1.93
U3KQE9 AL591424.2-201ENST00000617023 128 ntBASIC3.01□□□□□ -1.93
U3KQE9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
U3KQE9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.01□□□□□ -1.93
U3KQE9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.01□□□□□ -1.93
U3KQE9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
U3KQE9 AC018630.2-201ENST00000534866 2403 ntBASIC3.01□□□□□ -1.93
U3KQE9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
U3KQE9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
U3KQE9 MAPK10-372ENST00000641954 3413 ntBASIC3□□□□□ -1.93
U3KQE9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3□□□□□ -1.93
U3KQE9 RNA5SP130-201ENST00000364431 114 ntBASIC3□□□□□ -1.93
U3KQE9 RNU6-546P-201ENST00000383991 107 ntBASIC3□□□□□ -1.93
U3KQE9 RNU6-756P-201ENST00000383997 107 ntBASIC3□□□□□ -1.93
U3KQE9 SNORA1-201ENST00000384107 130 ntBASIC3□□□□□ -1.93
U3KQE9 DBIP2-201ENST00000419076 262 ntBASIC3□□□□□ -1.93
U3KQE9 AC123900.1-201ENST00000420390 96 ntBASIC3□□□□□ -1.93
U3KQE9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3□□□□□ -1.93
U3KQE9 AL139247.1-201ENST00000422768 325 ntBASIC3□□□□□ -1.93
U3KQE9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3□□□□□ -1.93
U3KQE9 SNRPGP3-201ENST00000469405 227 ntBASIC3□□□□□ -1.93
U3KQE9 NDUFA4P2-201ENST00000489989 244 ntBASIC3□□□□□ -1.93
U3KQE9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
U3KQE9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
U3KQE9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3□□□□□ -1.93
U3KQE9 MRPL49P2-201ENST00000521066 465 ntBASIC3□□□□□ -1.93
U3KQE9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
U3KQE9 MIR4700-201ENST00000578311 74 ntBASIC3□□□□□ -1.93
U3KQE9 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
U3KQE9 AC008507.4-201ENST00000585464 127 ntBASIC3□□□□□ -1.93
U3KQE9 AC012531.5-201ENST00000611375 151 ntBASIC3□□□□□ -1.93
U3KQE9 MIR6716-201ENST00000613413 80 ntBASIC3□□□□□ -1.93
U3KQE9 U2.20-201ENST00000613956 192 ntBASIC3□□□□□ -1.93
U3KQE9 AL137067.1-201ENST00000615933 120 ntBASIC3□□□□□ -1.93
U3KQE9 AC009831.4-201ENST00000620744 325 ntBASIC3□□□□□ -1.93
U3KQE9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
U3KQE9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3□□□□□ -1.93
U3KQE9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3□□□□□ -1.93
U3KQE9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
U3KQE9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
U3KQE9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
U3KQE9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
U3KQE9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
U3KQE9 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
U3KQE9 SNORA14A-201ENST00000364773 135 ntBASIC2.99□□□□□ -1.93
U3KQE9 Y_RNA.323-201ENST00000365157 109 ntBASIC2.99□□□□□ -1.93
U3KQE9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.99□□□□□ -1.93
U3KQE9 Y_RNA.348-201ENST00000365403 103 ntBASIC2.99□□□□□ -1.93
U3KQE9 SNORA56-201ENST00000383966 129 ntBASIC2.99□□□□□ -1.93
U3KQE9 RNU6-905P-201ENST00000384434 107 ntBASIC2.99□□□□□ -1.93
U3KQE9 Y_RNA.544-201ENST00000384650 113 ntBASIC2.99□□□□□ -1.93
U3KQE9 MIR199A2-201ENST00000385289 110 ntBASIC2.99□□□□□ -1.93
U3KQE9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.99□□□□□ -1.93
U3KQE9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.99□□□□□ -1.93
U3KQE9 CYP2C59P-201ENST00000457790 269 ntBASIC2.99□□□□□ -1.93
U3KQE9 AC106707.2-201ENST00000484182 374 ntBASIC2.99□□□□□ -1.93
U3KQE9 RPS26P48-201ENST00000491713 339 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms