Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RNU6-500P-201ENST00000362349 107 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 Y_RNA.399-201ENST00000383955 105 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-342P-201ENST00000384521 104 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 SNORD73A-201ENST00000386062 65 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 Y_RNA.598-201ENST00000410480 95 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 AL008987.1-201ENST00000415528 237 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 MTND3P9-201ENST00000429526 346 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 AC093019.1-201ENST00000443135 252 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 RPS20P10-201ENST00000451209 253 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 MRPS36P4-201ENST00000534436 298 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR6734-201ENST00000621166 68 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 ZNF204P-201ENST00000416749 2397 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1097P-201ENST00000363586 107 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 RNY4P34-201ENST00000364779 95 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-108P-201ENST00000365558 107 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 AC098592.1-201ENST00000419352 333 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 UBE2D3P4-201ENST00000441973 436 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 SNRPGP9-201ENST00000456025 225 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU7-167P-201ENST00000459160 62 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1037P-201ENST00000459571 107 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 AC105417.1-201ENST00000514691 285 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR4438-201ENST00000585271 93 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 Z84480.1-201ENST00000605131 311 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR6079-201ENST00000635807 62 ntBASIC0.1□□□□□ -2.39
TMEM56-RWDD3S4R434 AC005592.1-201ENST00000566527 1640 ntBASIC0.09□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1266P-201ENST00000362794 105 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR526A1-201ENST00000384897 85 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORD105-201ENST00000386910 85 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR1185-1-201ENST00000408598 86 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR1185-2-201ENST00000408687 86 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 RNA5SP193-201ENST00000410353 107 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AP000870.1-201ENST00000472927 406 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AF186996.7-201ENST00000492781 209 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU7-28P-201ENST00000516759 62 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU2-56P-201ENST00000516826 190 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-58P-201ENST00000517143 103 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AP003716.2-201ENST00000528260 108 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 7SK.7-201ENST00000603504 247 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORD11B-201ENST00000607707 90 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR7844-201ENST00000616161 122 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AC137590.2-201ENST00000619709 240 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 AL390237.1-201ENST00000404226 1415 ntBASIC0.09□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-42P-201ENST00000384165 107 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-177P-201ENST00000411257 104 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-195P-201ENST00000411352 109 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 GMFBP1-201ENST00000467831 427 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 AP000240.1-201ENST00000609910 452 ntBASIC0.08□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORA25.3-201ENST00000363205 127 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 Y_RNA.123-201ENST00000363338 102 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORD113-6-201ENST00000363345 75 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-137P-201ENST00000363680 108 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR487A-201ENST00000385009 80 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 MTCO2P34-201ENST00000421994 607 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AL009048.1-201ENST00000450437 298 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 ZNF114P1-201ENST00000453500 292 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU7-138P-201ENST00000459479 64 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 RNU6-430P-201ENST00000517078 107 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AC016957.1-201ENST00000534895 309 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 FGF7P1-201ENST00000582820 288 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 AC006566.1-201ENST00000608943 513 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 U2.17-201ENST00000611454 95 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 MIR924-201ENST00000638017 53 ntBASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.07□□□□□ -2.4
TMEM56-RWDD3S4R434 MIRLET7C-201ENST00000362160 84 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 Y_RNA.100-201ENST00000363141 102 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORD87-201ENST00000364849 89 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 RPL31P35-201ENST00000431058 377 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 MRPS10P1-201ENST00000448483 130 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 MTCO2P18-201ENST00000457151 658 ntBASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.06□□□□□ -2.4
TMEM56-RWDD3S4R434 AC010469.2-201ENST00000496412 480 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms