Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPS12P2-201ENST00000439728 269 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 Y_RNA.721-201ENST00000517207 102 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR4659A-201ENST00000580269 81 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR4435-1-201ENST00000582552 80 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 AL121655.1-201ENST00000605811 308 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR3674-201ENST00000636576 68 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA22B-201ENST00000383876 138 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR1253-201ENST00000408273 105 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC011406.1-201ENST00000512440 370 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-408P-201ENST00000515910 100 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC025647.1-201ENST00000517879 253 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC040926.1-201ENST00000530195 238 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AL049779.4-201ENST00000604500 156 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AL353149.1-201ENST00000610667 244 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC010297.1-201ENST00000623948 149 ntBASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A3BPQ9Y5P4 AC008555.8-201ENST00000623602 2168 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-301P-201ENST00000384277 107 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 MRPL42P3-201ENST00000401492 326 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 MTCYBP6-201ENST00000441810 138 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AL442663.2-201ENST00000554385 511 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AL109918.3-201ENST00000603072 338 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AC240442.1-201ENST00000616055 283 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AC022140.2-201ENST00000623500 188 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 AC091812.1-201ENST00000432235 1948 ntBASIC2.74□□□□□ -1.97
COL4A3BPQ9Y5P4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA63.7-201ENST00000365579 123 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA6-201ENST00000384033 151 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-708P-201ENST00000384217 107 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 Y_RNA.485-201ENST00000384395 102 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-1011P-201ENST00000384668 107 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 AL359511.1-201ENST00000402970 211 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 AC060773.1-201ENST00000421698 310 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 AC010469.2-201ENST00000496412 480 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 AC022616.4-201ENST00000522985 181 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 AC010205.1-201ENST00000616668 449 ntBASIC2.73□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA72.2-201ENST00000365028 127 ntBASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-101P-201ENST00000410323 104 ntBASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A3BPQ9Y5P4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 RNA5SP289-201ENST00000362332 137 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR515-2-201ENST00000384883 83 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR515-1-201ENST00000384884 83 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 RNA5SP508-201ENST00000411327 119 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 SUMO1P2-201ENST00000452524 304 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 U8.20-201ENST00000459445 131 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 RPL26P26-201ENST00000480251 434 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-1153P-201ENST00000516760 105 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 AC022432.1-201ENST00000595739 310 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 AC016925.2-201ENST00000605108 242 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.71□□□□□ -1.98
COL4A3BPQ9Y5P4 SNORA63-201ENST00000363450 132 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.158-201ENST00000363651 101 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-694P-201ENST00000364071 147 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 SNORA48.1-201ENST00000390879 135 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AL355497.1-201ENST00000406262 551 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 HMGN2P34-201ENST00000437647 269 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 IPO7P1-201ENST00000442031 636 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 YWHAEP4-201ENST00000505390 198 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AC005176.2-201ENST00000596933 147 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AC124312.5-201ENST00000604451 268 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.15-201ENST00000611544 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.16-201ENST00000613119 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.12-201ENST00000613778 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.20-201ENST00000613956 192 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.9-201ENST00000615427 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.11-201ENST00000616345 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.2-201ENST00000616535 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.3-201ENST00000617785 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.19-201ENST00000618602 191 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms