Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RNU1-139P-201ENST00000391307 165 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 RPL39P38-201ENST00000467018 153 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 AC027288.2-201ENST00000553028 243 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 MIR4300-201ENST00000581016 96 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 AC011476.5-201ENST00000615594 130 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 MIR376A1-201ENST00000616574 68 ntBASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SCAF8Q9UPN6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Z82209.1-201ENST00000422141 2135 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.60-201ENST00000362831 98 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 snoU2_19.2-201ENST00000363024 80 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RNU6-318P-201ENST00000384283 103 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.477-201ENST00000384352 108 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 MIR487A-201ENST00000385009 80 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 SNORA48.11-201ENST00000517015 89 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AC018630.3-201ENST00000542637 96 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 MIR4659A-201ENST00000580269 81 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AC012433.1-201ENST00000588916 398 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AL078605.1-201ENST00000603529 500 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 U4atac.1-201ENST00000618345 95 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AC135776.4-201ENST00000624300 1904 ntBASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAF8Q9UPN6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 LINC02555-201ENST00000563933 1951 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.319-201ENST00000365138 92 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.552-201ENST00000384665 112 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 RNU6-541P-201ENST00000384709 110 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 MIR221-201ENST00000385135 110 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 AC139712.2-201ENST00000424302 339 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 Z98949.2-201ENST00000440996 144 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 MTND4LP30-201ENST00000454092 297 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 AP000705.1-201ENST00000454567 350 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 RNU6-1023P-201ENST00000516137 106 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 SNORA31.16-201ENST00000516773 139 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 AL138963.2-201ENST00000605137 226 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 AP001282.2-201ENST00000616149 309 ntBASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCAF8Q9UPN6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNU4-15P-201ENST00000362613 141 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNA5SP361-201ENST00000362686 118 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 U3.9-201ENST00000363823 204 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNU6-926P-201ENST00000384075 107 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 MIR10B-201ENST00000385011 110 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNA5SP201-201ENST00000410316 124 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNU2-20P-201ENST00000410425 191 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 AC096920.1-201ENST00000423991 241 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 snoU13.6-201ENST00000458785 104 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 RNA5SP458-201ENST00000516188 119 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 Y_RNA.673-201ENST00000516306 88 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.73□□□□□ -1.97
SCAF8Q9UPN6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 SNORA20.1-201ENST00000364790 130 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 RNU6-937P-201ENST00000384325 106 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 RNU6-159P-201ENST00000391080 106 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 WARS2P1-201ENST00000429678 537 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 RNU6-58P-201ENST00000517143 103 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 UBL5P4-201ENST00000562584 236 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 MIR5695-201ENST00000579717 85 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 AC005296.1-201ENST00000616145 209 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SCAF8Q9UPN6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
SCAF8Q9UPN6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms