Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.637-201ENST00000459424 114 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1256P-201ENST00000516539 103 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1007P-201ENST00000516586 107 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AL138963.2-201ENST00000605137 226 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC024581.2-201ENST00000619986 252 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC092628.2-201ENST00000622492 339 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.172-201ENST00000363765 102 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.179-201ENST00000363844 90 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-356P-201ENST00000384140 107 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 MIR32-201ENST00000384965 70 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 MIR518D-201ENST00000385014 87 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-578P-201ENST00000390980 103 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AL358075.3-201ENST00000426289 226 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-625P-201ENST00000459412 107 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AL391903.3-201ENST00000612158 163 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AC006111.3-201ENST00000622137 383 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC068700.1-201ENST00000565862 3754 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-527P-201ENST00000363425 104 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-873P-201ENST00000363833 107 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1131P-201ENST00000364955 107 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.348-201ENST00000365403 103 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 SNORA29-201ENST00000384183 140 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 MIR181A2-201ENST00000384863 110 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1199P-201ENST00000411249 104 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 FABP5P15-201ENST00000453566 214 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 UBE2Q2P9-201ENST00000490086 202 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AP000867.2-201ENST00000532468 320 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 CR383656.8-201ENST00000549046 145 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 ZNF192P1-203ENST00000565888 810 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 MIR3646-201ENST00000578301 84 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 MIR4512-201ENST00000583257 77 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC006380.1-201ENST00000603598 186 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC108081.1-201ENST00000604358 221 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AL161798.1-201ENST00000604630 131 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC005296.1-201ENST00000616145 209 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 MIR6844-201ENST00000637122 62 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 ZNF702P-202ENST00000434269 1966 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
NOTCH3Q9UM47 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.101-201ENST00000363154 102 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNA5SP325-201ENST00000363756 130 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.369-201ENST00000365568 117 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1248P-201ENST00000391096 64 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNA5SP56-201ENST00000410277 118 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1064P-201ENST00000410626 104 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC009237.8-201ENST00000445492 379 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC107027.2-201ENST00000512197 115 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 RN7SKP164-201ENST00000516138 266 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC021269.2-201ENST00000532318 330 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 MED28P6-201ENST00000558776 231 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 SNORD84-203ENST00000584275 78 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 AC027309.3-201ENST00000623419 351 ntBASIC2□□□□□ -2.09
NOTCH3Q9UM47 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2□□□□□ -2.09
NOTCH3Q9UM47 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-843P-201ENST00000384454 104 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 SNORA8.3-201ENST00000384679 139 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AL714022.1-201ENST00000439897 151 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 UQCRHP3-201ENST00000451503 251 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC092798.1-201ENST00000458542 409 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RPL23AP14-201ENST00000468281 468 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RN7SL633P-201ENST00000488974 297 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 SCARNA8-201ENST00000515924 131 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1053P-201ENST00000515930 101 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-168P-201ENST00000516189 101 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC099654.7-201ENST00000635788 2127 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AL450326.2-201ENST00000421913 1962 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 SNORA25.7-201ENST00000364375 127 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-755P-201ENST00000364400 103 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-275P-201ENST00000364910 107 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 U8.10-201ENST00000384260 133 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-768P-201ENST00000384683 107 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 MIR27B-201ENST00000385129 97 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms