Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 Y_RNA.231-201ENST00000364358 102 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 SNORD87-201ENST00000364849 89 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 RPL37P10-201ENST00000412884 288 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 Z82188.1-201ENST00000436709 154 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AC079354.2-201ENST00000453523 154 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 RNA5SP54-201ENST00000516951 92 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AL158211.1-201ENST00000566763 763 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP50Q9UKX7 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 SNORD11B-201ENST00000607707 90 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 AL158209.2-201ENST00000619266 216 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 MIR8054-201ENST00000620877 86 ntBASIC1.01□□□□□ -2.25
NUP50Q9UKX7 RNU6-254P-201ENST00000363377 107 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.151-201ENST00000363566 112 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.355-201ENST00000365462 98 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 RNU6-1068P-201ENST00000410958 103 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 AL353572.1-201ENST00000442490 417 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1□□□□□ -2.25
NUP50Q9UKX7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1□□□□□ -2.25
NUP50Q9UKX7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1□□□□□ -2.25
NUP50Q9UKX7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1□□□□□ -2.25
NUP50Q9UKX7 MIR3611-201ENST00000584484 83 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
NUP50Q9UKX7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU1-22P-201ENST00000363334 158 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.372-201ENST00000365599 102 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU6-245P-201ENST00000384020 107 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 SNORA25-201ENST00000384384 134 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU6-790P-201ENST00000384479 105 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 MIR32-201ENST00000384965 70 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 CALM2P3-201ENST00000400429 449 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU6-1186P-201ENST00000410429 97 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AL445305.1-201ENST00000432577 575 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.99□□□□□ -2.25
NUP50Q9UKX7 COX6CP14-201ENST00000469580 174 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU6-58P-201ENST00000517143 103 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AK6P2-201ENST00000549020 471 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.99□□□□□ -2.25
NUP50Q9UKX7 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AC136443.5-201ENST00000603741 370 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 OR4G1P-203ENST00000641984 1631 ntBASIC0.99□□□□□ -2.25
NUP50Q9UKX7 AP000568.1-201ENST00000282964 442 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 SNORD115-8-201ENST00000363856 82 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.796-201ENST00000364268 102 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.799-201ENST00000364992 102 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 SNORD115-38-201ENST00000365037 82 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 MTCO3P40-201ENST00000392516 676 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP50Q9UKX7 ERLEC1P1-201ENST00000433806 578 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 RPL39P38-201ENST00000467018 153 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 SNORA25.14-201ENST00000516481 132 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 RNU6-405P-201ENST00000516637 110 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 RNU7-128P-201ENST00000517247 62 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 BX284668.6-201ENST00000606899 438 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 AC006504.8-201ENST00000621046 635 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 AL359880.1-201ENST00000621879 266 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 AC068137.3-201ENST00000639191 341 ntBASIC0.98□□□□□ -2.25
NUP50Q9UKX7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU4-9P-201ENST00000364951 139 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU6-128P-201ENST00000383976 107 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU6-259P-201ENST00000383999 107 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU6-1042P-201ENST00000384204 107 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 SNORA12.1-201ENST00000390873 148 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU6-440P-201ENST00000390882 105 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AF228730.1-201ENST00000397972 663 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 MIR1185-2-201ENST00000408687 86 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU2-66P-201ENST00000410650 161 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC245047.3-201ENST00000429428 127 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 PCMTD1P1-201ENST00000455560 355 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RPS29P29-201ENST00000456396 171 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 Y_RNA.693-201ENST00000516641 110 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 FRG2DP-202ENST00000566967 323 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC080078.3-201ENST00000605407 463 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms