Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR1302-7-201ENST00000408841 72 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MTND3P17-201ENST00000416968 344 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC109327.2-201ENST00000448339 378 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC010468.3-201ENST00000508225 458 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AP000568.1-201ENST00000282964 442 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNA5SP205-201ENST00000364653 136 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU6-395P-201ENST00000365662 106 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC119618.1-201ENST00000434191 222 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MTCO3P17-201ENST00000443775 513 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC093850.1-201ENST00000454121 251 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 USP9YP25-201ENST00000457708 443 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MTCO1P31-201ENST00000506355 492 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MTCO3P9-201ENST00000506989 781 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU7-28P-201ENST00000516759 62 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU6-897P-201ENST00000517135 105 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC026616.1-201ENST00000523157 525 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC090517.1-201ENST00000569307 266 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MIR3681-201ENST00000580089 72 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 SNORD98-201ENST00000636377 67 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 AC092104.1-201ENST00000497346 1441 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU6-97P-201ENST00000363387 104 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 RNU6-396P-201ENST00000365369 105 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 RNU2-3P-201ENST00000410144 191 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 AC092427.1-201ENST00000439177 601 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 MTND1P36-201ENST00000522384 936 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 AL590491.3-201ENST00000610731 82 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 U6.42-201ENST00000618440 107 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 SNORD38B-202ENST00000625943 69 ntBASIC-0.97□□□□□ -2.56
SCN11AQ9UI33 SNORA33-201ENST00000363664 130 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-701P-201ENST00000384059 107 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-364P-201ENST00000384387 107 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AL359634.1-202ENST00000404721 284 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC078809.1-201ENST00000427601 140 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-448P-201ENST00000517052 107 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC087883.1-201ENST00000551882 391 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC063944.3-201ENST00000609969 533 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-811P-201ENST00000384069 107 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 SNORA26-201ENST00000391286 122 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 USP9YP29-201ENST00000445112 563 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC079354.2-201ENST00000453523 154 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC010424.1-201ENST00000506336 297 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-63P-201ENST00000516690 95 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 ZNF321P-202ENST00000550843 495 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 MIR3925-201ENST00000584674 77 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AL022154.1-201ENST00000604698 785 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC091304.9-201ENST00000612091 226 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC005520.5-201ENST00000613926 164 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 AC253576.2-201ENST00000618815 580 ntBASIC-0.98□□□□□ -2.57
SCN11AQ9UI33 RNU6-378P-201ENST00000384324 107 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 MIR217-201ENST00000384817 110 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 AC010525.2-201ENST00000590920 195 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 AL117336.2-201ENST00000602435 335 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 AC010999.1-201ENST00000611856 324 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 MIR6828-201ENST00000636181 60 ntBASIC-0.99□□□□□ -2.57
SCN11AQ9UI33 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1□□□□□ -2.57
SCN11AQ9UI33 RNU6-1141P-201ENST00000364520 107 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 SNORD83B-201ENST00000386745 93 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 RNU6-278P-201ENST00000390945 109 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 SNORA3B-201ENST00000391305 131 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 RNU4-22P-201ENST00000411058 166 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 RNU6-953P-201ENST00000459154 107 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 RNU7-43P-201ENST00000516554 64 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1□□□□□ -2.57
SCN11AQ9UI33 MIR5706-201ENST00000579841 80 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 AC008752.3-201ENST00000588113 712 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 AL354696.1-201ENST00000614652 497 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1□□□□□ -2.57
SCN11AQ9UI33 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 AL445264.1-201ENST00000621719 171 ntBASIC-1□□□□□ -2.57
SCN11AQ9UI33 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIR526A1-201ENST00000384897 85 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AL512326.2-201ENST00000426359 151 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MTND1P4-201ENST00000435196 415 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AC112206.4-201ENST00000515142 405 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 RNU7-41P-201ENST00000515917 61 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AP001328.1-201ENST00000528550 176 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms