Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 SERF1AP1-201ENST00000514575 187 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 MIR5694-201ENST00000581190 76 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 MZT1P2-201ENST00000604387 248 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AL357075.2-201ENST00000614906 189 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AC069528.2-201ENST00000624849 1991 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 SNORA25.6-201ENST00000364121 118 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 RNU6-326P-201ENST00000365480 107 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.539-201ENST00000384635 107 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AC009310.1-201ENST00000414414 451 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 EIF4EP4-201ENST00000424916 578 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AL139109.1-201ENST00000455491 297 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AC091179.3-201ENST00000474761 144 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 RNU6-111P-201ENST00000517179 105 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.73□□□□□ -1.97
DKK3Q9UBP4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DKK3Q9UBP4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
DKK3Q9UBP4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DKK3Q9UBP4 MIR410-201ENST00000362222 80 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 RNY1-201ENST00000364228 113 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AL033519.2-201ENST00000403958 392 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AL603910.2-201ENST00000407268 136 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 IFNA11P-201ENST00000446352 526 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AC145146.1-201ENST00000496370 254 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 RNA5SP112-201ENST00000515937 99 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 RNU6-344P-201ENST00000516635 111 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AC018448.1-201ENST00000552843 316 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.72□□□□□ -1.97
DKK3Q9UBP4 AC027176.1-201ENST00000560204 514 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 MIR3616-201ENST00000584070 92 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 RPL17P51-201ENST00000605218 238 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 BX284668.6-201ENST00000606899 438 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
DKK3Q9UBP4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
DKK3Q9UBP4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
DKK3Q9UBP4 MIR144-201ENST00000384886 86 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 SNORA46.1-201ENST00000391069 153 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 SNORA53-201ENST00000391141 249 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 ELOCP21-201ENST00000412558 336 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 UQCRBP2-201ENST00000447827 297 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 RNA5SP82-201ENST00000516707 92 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 RNU7-110P-201ENST00000516891 62 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 RRN3P3-201ENST00000549207 578 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 MIR4765-201ENST00000585007 77 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 AC005176.2-201ENST00000596933 147 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 AC010900.2-201ENST00000604508 210 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 AC022441.3-201ENST00000605737 136 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 AC005562.2-201ENST00000618264 111 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 AL590808.1-201ENST00000618696 141 ntBASIC2.71□□□□□ -1.98
DKK3Q9UBP4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
DKK3Q9UBP4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU6-486P-201ENST00000363116 107 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU6-21P-201ENST00000384710 107 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 MIR524-201ENST00000385242 87 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 MIR549A-201ENST00000385268 96 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 MT-TR-201ENST00000387439 65 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU2-64P-201ENST00000411315 191 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RPL23AP36-201ENST00000413895 458 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU6-625P-201ENST00000459412 107 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 RNU2-31P-201ENST00000516954 155 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.7□□□□□ -1.98
DKK3Q9UBP4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.7□□□□□ -1.98
DKK3Q9UBP4 AC009779.6-201ENST00000603972 165 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 U2.14-201ENST00000615943 113 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DKK3Q9UBP4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms