Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 AC018634.1-201ENST00000437554 401 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 CHEK2P4-201ENST00000450340 246 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 snoU13.15-201ENST00000459407 104 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RNU6-498P-201ENST00000459468 107 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 CYCSP23-201ENST00000519781 313 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 uc_338.22-201ENST00000622722 187 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 snoZ196.1-201ENST00000625269 89 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 MTND5P6-201ENST00000422338 1798 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 SNORD42.2-201ENST00000365570 69 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 RNU6-856P-201ENST00000516959 98 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 SUMO2P18-201ENST00000518873 252 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 AK6P2-201ENST00000549020 471 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 SNRPGP18-201ENST00000553000 214 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 AL442163.3-201ENST00000554110 156 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 VN1R91P-201ENST00000594377 169 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 MIR6873-201ENST00000622788 63 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 AC138305.3-201ENST00000624988 240 ntBASIC2.13□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 RNU6-708P-201ENST00000384217 107 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 RN7SKP192-201ENST00000411291 327 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 MTCO2P12-201ENST00000427426 682 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 SNORA40.9-201ENST00000515895 93 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 HSBP1P1-201ENST00000555205 166 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 AC007485.1-201ENST00000616755 206 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 MIR4272-201ENST00000635924 64 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
HCN3Q9P1Z3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 ZNF702P-202ENST00000434269 1966 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 RNU1-115P-201ENST00000365329 160 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 RNY1P14-201ENST00000384426 108 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 MIR1253-201ENST00000408273 105 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC060773.1-201ENST00000421698 310 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC018865.2-201ENST00000423631 129 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC096920.1-201ENST00000423991 241 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AL137792.2-201ENST00000443484 235 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.639-201ENST00000458981 102 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 RNU4-77P-201ENST00000516692 156 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC018448.1-201ENST00000552843 316 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AC091925.1-201ENST00000623204 462 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 AL606534.2-204ENST00000635008 178 ntBASIC2.11□□□□□ -2.07
HCN3Q9P1Z3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.11-201ENST00000362375 109 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.112-201ENST00000363250 102 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.395-201ENST00000383945 109 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 MTCO3P19-201ENST00000415864 321 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AL160004.2-201ENST00000432935 350 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RNU6-625P-201ENST00000459412 107 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AC011406.1-201ENST00000512440 370 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AC074133.1-201ENST00000515696 183 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RNU6-408P-201ENST00000515910 100 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RNU6-911P-201ENST00000516523 104 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RN7SKP295-201ENST00000517264 153 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AL138825.1-201ENST00000618587 192 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.1□□□□□ -2.07
HCN3Q9P1Z3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.138-201ENST00000363462 102 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RNY3P4-201ENST00000384428 101 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 AL355497.1-201ENST00000406262 551 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RNA5SP501-201ENST00000410990 112 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 ELOCP21-201ENST00000412558 336 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms