Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 AC010329.5-201ENST00000623497 2174 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 Y_RNA.35-201ENST00000362601 101 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 RNU6-915P-201ENST00000364943 103 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 RNU6-407P-201ENST00000365280 104 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 RNU6-905P-201ENST00000384434 107 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 MIR626-201ENST00000385032 94 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 AC006461.1-201ENST00000412637 326 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 YPEL5P1-201ENST00000419731 367 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 ZNF702P-202ENST00000434269 1966 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 AC146507.2-201ENST00000460608 476 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 SCARNA8-201ENST00000515924 131 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 RNU6-1007P-201ENST00000516586 107 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 ACA59.2-201ENST00000517061 156 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 CYP4A27P-201ENST00000567218 190 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 MIR3646-201ENST00000578301 84 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 SNRPGP20-201ENST00000604477 205 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 AL137790.1-201ENST00000634283 177 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
LMCD1Q9NZU5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 RNU6-1164P-201ENST00000364428 107 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 Y_RNA.280-201ENST00000364765 112 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 SNORD87-201ENST00000364849 89 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 Y_RNA.287-201ENST00000364853 94 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 RNU6-622P-201ENST00000384272 103 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 SNORA8.3-201ENST00000384679 139 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 RNU6-768P-201ENST00000384683 107 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AL139095.1-201ENST00000404326 391 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 MIR320B2-201ENST00000408479 138 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC245047.8-201ENST00000456455 284 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 RPS4XP13-201ENST00000483219 789 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC013412.1-201ENST00000610687 192 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC069528.2-201ENST00000624849 1991 ntBASIC3.56□□□□□ -1.84
LMCD1Q9NZU5 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 RNA5SP432-201ENST00000362480 116 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 RNU6-640P-201ENST00000363693 105 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 RNU6-294P-201ENST00000364999 102 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 SNORD116-21-201ENST00000384507 92 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 CBX3P9-201ENST00000402326 552 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AL133475.1-201ENST00000404414 305 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 Y_RNA.630-201ENST00000411370 108 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 RPL31P41-201ENST00000477967 372 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AIG1P1-201ENST00000503376 148 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AL110115.1-201ENST00000614396 364 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AL078604.3-201ENST00000615580 211 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 AC018692.3-201ENST00000623929 123 ntBASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMCD1Q9NZU5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 MIR449A-201ENST00000362113 91 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 RNU6-969P-201ENST00000383900 105 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 RNU6-643P-201ENST00000384018 107 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AL031003.1-201ENST00000404229 172 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 HMGN2P20-201ENST00000437531 273 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AL121914.1-201ENST00000450188 156 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AC006199.1-201ENST00000548728 219 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 MIR3923-201ENST00000579521 83 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 MIR3121-201ENST00000579680 77 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AL356575.1-201ENST00000603008 283 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AL391813.1-201ENST00000603098 260 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AL670379.3-201ENST00000605040 251 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 uc_338.28-201ENST00000612082 187 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 MIR6715A-201ENST00000615929 79 ntBASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 AC007656.2-201ENST00000624902 4547 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms