Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL357075.2-201ENST00000614906 189 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AC137590.2-201ENST00000619709 240 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-879P-201ENST00000364328 108 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-541P-201ENST00000384709 110 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR329-1-201ENST00000385028 80 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR95-201ENST00000385072 81 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR561-201ENST00000385216 97 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AL079342.1-201ENST00000401460 267 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AL359511.1-201ENST00000402970 211 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 RPL26P26-201ENST00000480251 434 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 HSPE1P18-201ENST00000517602 280 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 PRELID2P1-201ENST00000552837 301 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR3128-201ENST00000581957 66 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR4658-201ENST00000584344 65 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AC240442.1-201ENST00000616055 283 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AC005296.1-201ENST00000616145 209 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 AC078938.1-201ENST00000620993 318 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 MTND5P6-201ENST00000422338 1798 ntBASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.45□□□□□ -2.02
NCKIPSDQ9NZQ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR335-201ENST00000362173 94 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-137P-201ENST00000363680 108 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-926P-201ENST00000384075 107 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORD78.2-201ENST00000391076 69 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR548H3-201ENST00000408771 118 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 AC004866.1-201ENST00000411748 78 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 AC098869.1-201ENST00000481627 292 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU1-41P-201ENST00000516161 162 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU1-48P-201ENST00000516400 162 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-570P-201ENST00000517051 105 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR4659A-201ENST00000580269 81 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.44□□□□□ -2.02
NCKIPSDQ9NZQ3 LINC02555-201ENST00000563933 1951 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 ZNF204P-201ENST00000416749 2397 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU1-23P-201ENST00000363361 144 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-944P-201ENST00000364023 107 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR518C-201ENST00000384822 101 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORD115-46-201ENST00000390982 71 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORA12-201ENST00000391162 147 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORD12B-201ENST00000410433 91 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RPS23P5-201ENST00000495419 428 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 RN7SKP49-201ENST00000516675 260 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR4300-201ENST00000581016 96 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 U4atac.1-201ENST00000618345 95 ntBASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.43□□□□□ -2.02
NCKIPSDQ9NZQ3 BX322639.1-202ENST00000423987 2213 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORD81.1-201ENST00000363064 77 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 U3.9-201ENST00000363823 204 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-546P-201ENST00000383991 107 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR215-201ENST00000384858 110 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 MRPL35P1-201ENST00000404272 572 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU2-20P-201ENST00000410425 191 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU2-32P-201ENST00000411193 191 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU2-64P-201ENST00000411315 191 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 MTND4LP30-201ENST00000454092 297 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 AC234781.5-201ENST00000508429 271 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 MTND1P19-201ENST00000511780 315 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms