Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC022217.4-201ENST00000604389 163 ntBASIC1.15□□□□□ -2.23
KCNIP1Q9NZI2 MIR3688-2-201ENST00000636963 87 ntBASIC1.15□□□□□ -2.23
KCNIP1Q9NZI2 MIR3662-201ENST00000637030 95 ntBASIC1.15□□□□□ -2.23
KCNIP1Q9NZI2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KCNIP1Q9NZI2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-137P-201ENST00000363680 108 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.301-201ENST00000364990 103 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 SNORD115-47-201ENST00000391226 86 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 MIR548F1-201ENST00000408667 84 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AC004965.1-201ENST00000413033 213 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 COX6CP10-201ENST00000416832 224 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AC010154.1-201ENST00000425857 269 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 USP9YP30-201ENST00000430729 455 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 RPS26P45-201ENST00000471748 340 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 RNA5SP61-201ENST00000516453 100 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-566P-201ENST00000516790 107 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-1198P-201ENST00000516904 67 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AC024995.1-201ENST00000523014 93 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AL929325.1-201ENST00000603096 117 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 AL078604.3-201ENST00000615580 211 ntBASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KCNIP1Q9NZI2 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.48-201ENST00000362710 103 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 U3.8-201ENST00000363675 217 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-596P-201ENST00000365395 98 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.405-201ENST00000383979 100 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.451-201ENST00000384200 100 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.524-201ENST00000384564 100 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.561-201ENST00000384694 100 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 SNORA12.1-201ENST00000390873 148 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 AC008134.1-201ENST00000420943 193 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 RNU7-34P-201ENST00000459394 64 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 AL365434.2-201ENST00000607979 234 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 U4.5-201ENST00000617137 123 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 ZNF209P-201ENST00000593450 2304 ntBASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.157-201ENST00000363638 102 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-595P-201ENST00000363944 107 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-793P-201ENST00000384233 104 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-541P-201ENST00000384709 110 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNA5SP323-201ENST00000391094 133 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNA5SP118-201ENST00000410385 109 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 MTND3P23-201ENST00000431980 347 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AC010095.1-201ENST00000443543 144 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RPS29P23-201ENST00000458635 123 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AC093303.1-201ENST00000514549 295 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 RNU4-49P-201ENST00000516080 140 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AP000889.1-201ENST00000530968 660 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 MIR3937-201ENST00000580135 106 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL390123.1-201ENST00000603216 237 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL645939.4-201ENST00000604495 135 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL355802.3-201ENST00000607571 545 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL121890.5-201ENST00000620848 304 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 AL133216.2-202ENST00000634512 349 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 ZNF72P-201ENST00000425869 1908 ntBASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.12□□□□□ -2.23
KCNIP1Q9NZI2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 ZNF299P-201ENST00000406845 1804 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-222P-201ENST00000362438 107 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 RNU4-13P-201ENST00000364019 141 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.453-201ENST00000384223 109 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.473-201ENST00000384333 102 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-1215P-201ENST00000384441 102 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 RNA5SP213-201ENST00000391031 106 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AL356776.1-201ENST00000406574 447 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 MIR1261-201ENST00000408659 82 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AC009161.1-201ENST00000417306 376 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AC092989.1-201ENST00000481235 277 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AC091144.1-201ENST00000519573 138 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AL590705.4-201ENST00000532209 134 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms