Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 MTCYBP10-201ENST00000424905 650 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC108667.1-201ENST00000428618 249 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC092423.1-201ENST00000430165 186 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC009237.7-201ENST00000447357 229 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC016925.1-201ENST00000458303 298 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC105758.1-201ENST00000506038 399 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC093303.1-201ENST00000514549 295 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 RNA5SP54-201ENST00000516951 92 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC125232.2-201ENST00000592457 143 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 7SK.7-201ENST00000603504 247 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 RPL17P51-201ENST00000605218 238 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AL050343.2-201ENST00000607338 280 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AC087588.2-201ENST00000617667 426 ntBASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
NLGN3Q9NZ94 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RNU6-1115P-201ENST00000362490 106 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RNU6-137P-201ENST00000363680 108 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.187-201ENST00000363918 113 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 SNORD114-6-201ENST00000364393 72 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.364-201ENST00000365532 101 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RNU6-541P-201ENST00000384709 110 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.579-201ENST00000390939 94 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 USP9YP16-201ENST00000430287 407 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 USP9YP23-201ENST00000455085 407 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 AC108729.3-201ENST00000513484 108 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RNU6-1114P-201ENST00000516022 107 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 RNU6-699P-201ENST00000517081 110 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 MIR5695-201ENST00000579717 85 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 SNRPGP20-201ENST00000604477 205 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 AL133255.1-201ENST00000606374 441 ntBASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.79□□□□□ -2.12
NLGN3Q9NZ94 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.99-201ENST00000363138 105 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RNY3P11-201ENST00000364153 102 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.394-201ENST00000383942 103 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RNU6-245P-201ENST00000384020 107 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.463-201ENST00000384271 102 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.496-201ENST00000384444 101 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.557-201ENST00000384680 107 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 Y_RNA.577-201ENST00000384794 101 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 MIR1283-2-201ENST00000408621 87 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RNU6-1156P-201ENST00000410365 100 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RPL23AP36-201ENST00000413895 458 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AL158823.1-201ENST00000418441 478 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 BX510359.4-201ENST00000423750 193 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 EIF1P2-201ENST00000428233 350 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC236972.2-201ENST00000434979 310 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC010531.2-201ENST00000465012 153 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC091179.3-201ENST00000474761 144 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 SNORA25.14-201ENST00000516481 132 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AK6P2-201ENST00000549020 471 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 RRN3P3-201ENST00000549207 578 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC090617.3-201ENST00000573670 475 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC133104.2-201ENST00000615272 193 ntBASIC1.78□□□□□ -2.12
NLGN3Q9NZ94 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNA5SP361-201ENST00000362686 118 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNU6-727P-201ENST00000363592 107 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 Y_RNA.358-201ENST00000365491 99 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNU6-281P-201ENST00000384212 103 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 Y_RNA.535-201ENST00000384612 99 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 MIR1283-1-201ENST00000408494 87 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 RNU6-1001P-201ENST00000411265 100 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 AC007098.1-201ENST00000420122 367 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 AC123900.1-201ENST00000420390 96 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 MTCO1P44-201ENST00000441935 243 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 CHEK2P4-201ENST00000450340 246 ntBASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.77□□□□□ -2.13
NLGN3Q9NZ94 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms