Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU6-969P-201ENST00000383900 105 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RNU6-643P-201ENST00000384018 107 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 SNORA72.4-201ENST00000384174 132 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 MIR616-201ENST00000385293 97 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 SNORA40.5-201ENST00000391061 128 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 MIR1290-201ENST00000408735 78 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RNU6-588P-201ENST00000410281 105 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 CYCSP49-201ENST00000420810 319 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RPL37P4-201ENST00000448908 268 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 AL121914.1-201ENST00000450188 156 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 SNORA31.8-201ENST00000516327 108 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 MTND5P34-201ENST00000568888 325 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 AC006254.2-201ENST00000603259 279 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 MIR6852-201ENST00000621699 66 ntBASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC092268.1-201ENST00000342691 405 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 MIR15B-201ENST00000385045 98 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 RNA5SP475-201ENST00000410568 110 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC078809.1-201ENST00000427601 140 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AL139132.1-201ENST00000431587 344 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 RN7SKP179-201ENST00000516126 217 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC090049.2-201ENST00000550377 109 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 FTX_3.1-201ENST00000610451 147 ntBASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SMPD4Q9NXE4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 SNORD115-30-201ENST00000364117 82 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 RNU1-73P-201ENST00000383971 164 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AL031003.1-201ENST00000404229 172 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 RNU6-168P-201ENST00000516189 101 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 AC006380.1-201ENST00000603598 186 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 MIR6844-201ENST00000637122 62 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 MIR3914-2-201ENST00000637339 95 ntBASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.09□□□□□ -1.91
SMPD4Q9NXE4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SMPD4Q9NXE4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMPD4Q9NXE4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 SNORA25.7-201ENST00000364375 127 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 RNU6-915P-201ENST00000364943 103 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.309-201ENST00000365046 111 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 RNU6-245P-201ENST00000384020 107 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 RNU6-217P-201ENST00000384164 104 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AL355497.1-201ENST00000406262 551 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AC004866.1-201ENST00000411748 78 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AC063976.4-201ENST00000421971 163 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AL357134.1-201ENST00000445848 426 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 RNU5E-3P-201ENST00000515913 68 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 NACAP3-201ENST00000552100 481 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AL391903.3-201ENST00000612158 163 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
SMPD4Q9NXE4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 RNU1-62P-201ENST00000362599 164 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AC019205.3-201ENST00000424573 156 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AL590383.1-201ENST00000428602 75 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AL135938.1-201ENST00000443141 297 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms