Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
MKS1Q9NXB0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.72□□□□□ -1.97
MKS1Q9NXB0 AC007179.3-201ENST00000604976 235 ntBASIC2.72□□□□□ -1.97
MKS1Q9NXB0 AC022202.1-201ENST00000613515 211 ntBASIC2.72□□□□□ -1.97
MKS1Q9NXB0 U4.1-201ENST00000620349 87 ntBASIC2.72□□□□□ -1.97
MKS1Q9NXB0 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
MKS1Q9NXB0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 SNORA38.1-201ENST00000364172 131 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 RNU1-52P-201ENST00000384190 164 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 RNU6-102P-201ENST00000384485 104 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 MIR1302-6-201ENST00000408466 90 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AC096920.1-201ENST00000423991 241 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AC005042.3-201ENST00000453230 174 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AL139109.1-201ENST00000455491 297 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 RNU6-155P-201ENST00000516347 100 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 RNU6-570P-201ENST00000517051 105 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 RNU2-12P-201ENST00000517216 168 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AC074050.1-201ENST00000563247 211 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 AC096577.2-201ENST00000611455 153 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
MKS1Q9NXB0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
MKS1Q9NXB0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 RNU4-90P-201ENST00000362773 141 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 RNU6-472P-201ENST00000384299 107 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 MT-TW-201ENST00000387382 68 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 RN7SKP284-201ENST00000411002 343 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AC245102.2-201ENST00000448956 180 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 HSPE1P25-201ENST00000455484 251 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 HMGB3P17-201ENST00000504195 649 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 MIR3149-201ENST00000584629 83 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AC006380.1-201ENST00000603598 186 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 YPEL5P2-201ENST00000605553 359 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 AC006001.4-201ENST00000622243 395 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 U6.104-201ENST00000637979 90 ntBASIC2.7□□□□□ -1.98
MKS1Q9NXB0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MKS1Q9NXB0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 RNU6-1203P-201ENST00000410703 110 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 TRBVB-201ENST00000477100 408 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AC107222.1-201ENST00000510899 637 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 RNU6-856P-201ENST00000516959 98 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AC025647.1-201ENST00000517879 253 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 IGLV3-17-201ENST00000519099 244 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 MIR3684-201ENST00000579779 74 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 AC245884.12-201ENST00000615364 59 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 U6.115-201ENST00000636045 103 ntBASIC2.69□□□□□ -1.98
MKS1Q9NXB0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MKS1Q9NXB0 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 MIR208A-201ENST00000362287 71 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 SNORD81.1-201ENST00000363064 77 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.243-201ENST00000364481 109 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 RNU6-160P-201ENST00000384591 107 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC008134.1-201ENST00000420943 193 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 RPL23AP3-201ENST00000453844 468 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 BX510359.1-201ENST00000456973 237 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 SNORA74D-201ENST00000516404 141 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 RNA5SP137-201ENST00000516833 135 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC008749.1-201ENST00000597650 306 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 AC127459.3-201ENST00000624328 466 ntBASIC2.68□□□□□ -1.98
MKS1Q9NXB0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MKS1Q9NXB0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
MKS1Q9NXB0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MKS1Q9NXB0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.67□□□□□ -1.98
MKS1Q9NXB0 SNORD115-30-201ENST00000364117 82 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 SNORD114-6-201ENST00000364393 72 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 RNU6-290P-201ENST00000365212 101 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 SNORA6-201ENST00000384033 151 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 AC016909.1-201ENST00000415916 166 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 AC025750.2-201ENST00000442609 450 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 RNU1-131P-201ENST00000458943 161 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 MIR5195-201ENST00000583555 115 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms