Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AP002088.1-201ENST00000382740 395 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNU6-22P-201ENST00000384355 107 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNU6-417P-201ENST00000384712 107 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 MIR616-201ENST00000385293 97 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 MIR1283-1-201ENST00000408494 87 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 MIR1294-201ENST00000408503 142 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNU2-51P-201ENST00000410708 197 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC022018.1-201ENST00000430685 241 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 HSPE1P21-201ENST00000438283 308 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC245047.8-201ENST00000456455 284 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNU7-57P-201ENST00000459540 60 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC107027.2-201ENST00000512197 115 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNA5SP272-201ENST00000516095 111 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RNU6-62P-201ENST00000516526 102 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC022616.8-201ENST00000533569 253 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC109810.1-201ENST00000534066 224 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AP003122.5-201ENST00000527668 3766 ntBASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM39AQ9NV64 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 Y_RNA.124-201ENST00000363339 93 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 Y_RNA.172-201ENST00000363765 102 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 RNU6-1083P-201ENST00000384022 107 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 MIR569-201ENST00000385228 96 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 Y_RNA.586-201ENST00000391146 98 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 MIR300-201ENST00000401138 83 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 RPL23AP67-201ENST00000465341 474 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 RNA5SP356-201ENST00000515972 94 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 SCARNA17.1-201ENST00000516211 143 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 SCARNA17.2-201ENST00000516334 143 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 MIR4753-201ENST00000585119 83 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 SCARNA17.4-201ENST00000614296 143 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 MIR6715A-201ENST00000615929 79 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
TMEM39AQ9NV64 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 RNU1-70P-201ENST00000362618 164 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 RNU6-486P-201ENST00000363116 107 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 SNORA71.1-201ENST00000364523 117 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 SNORA7.4-201ENST00000384249 137 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 AC074290.1-201ENST00000448883 135 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 GTF3AP2-201ENST00000557014 266 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 MIR4724-201ENST00000579485 89 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 MIR548X2-201ENST00000579776 100 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 MIR2682-201ENST00000580305 110 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 MIR3162-201ENST00000581818 82 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 MIR3945-201ENST00000581853 98 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 UCA1.1-201ENST00000620952 75 ntBASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TMEM39AQ9NV64 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 SNORD114-7-201ENST00000362520 77 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 U8.7-201ENST00000364940 136 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 RNU6-144P-201ENST00000383951 107 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 SNORA20B-201ENST00000384220 132 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 SNORD14D-201ENST00000384390 87 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 RNU6-1274P-201ENST00000384557 107 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 MIR873-201ENST00000401120 77 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 AL355796.1-201ENST00000406706 323 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 AL121890.1-201ENST00000435457 205 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 MRPS36P2-201ENST00000512569 299 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 MIR5688-201ENST00000580619 83 ntBASIC3.52□□□□□ -1.85
TMEM39AQ9NV64 AC110079.1-202ENST00000635213 138 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms