Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.25□□□□□ -2.37
CISHQ9NSE2 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 MIR6516-201ENST00000630554 81 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 RNU1-119P-201ENST00000391122 165 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 RNU6-195P-201ENST00000411352 109 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.24□□□□□ -2.37
CISHQ9NSE2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.24□□□□□ -2.37
CISHQ9NSE2 AC004854.1-201ENST00000440356 349 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 ZNF114P1-201ENST00000453500 292 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.24□□□□□ -2.37
CISHQ9NSE2 TPT1P7-201ENST00000458300 517 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 RNU7-138P-201ENST00000459479 64 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 RNU6-1037P-201ENST00000459571 107 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 AC105417.1-201ENST00000514691 285 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 SNORD111.1-201ENST00000516421 86 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 AL096861.1-201ENST00000610899 123 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 SCARNA4-201ENST00000629045 128 ntBASIC0.24□□□□□ -2.37
CISHQ9NSE2 MTND4P4-201ENST00000439033 1366 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 RNU2-29P-201ENST00000410423 189 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 RNU2-70P-201ENST00000410718 179 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 SSR1P2-201ENST00000415208 787 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 RPL23AP50-201ENST00000434149 455 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC009961.2-201ENST00000435771 251 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC093019.1-201ENST00000443135 252 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 NDUFB4P10-201ENST00000452541 359 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 RNU7-28P-201ENST00000516759 62 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 MTND4LP26-201ENST00000518144 282 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.23□□□□□ -2.37
CISHQ9NSE2 AL022161.1-201ENST00000604390 213 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 SNORD11B-201ENST00000607707 90 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 U2.17-201ENST00000611454 95 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AL136317.1-201ENST00000612653 226 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC137590.2-201ENST00000619709 240 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC010608.3-201ENST00000625048 527 ntBASIC0.23□□□□□ -2.37
CISHQ9NSE2 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 RNY4P34-201ENST00000364779 95 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 RNU6-606P-201ENST00000384721 111 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 SNORD73A-201ENST00000386062 65 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 U8.16-201ENST00000391279 133 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 CALM2P4-201ENST00000430810 426 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 DAP3P1-201ENST00000441522 278 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 USP9YP29-201ENST00000445112 563 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AF186996.7-201ENST00000492781 209 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 SNORA68.3-201ENST00000515906 83 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 FRG2DP-202ENST00000566967 323 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 FGF7P1-201ENST00000582820 288 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AC131055.1-201ENST00000584626 316 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AC234772.3-201ENST00000602277 528 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 7SK.10-201ENST00000621414 298 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 AP002371.2-201ENST00000624450 503 ntBASIC0.22□□□□□ -2.37
CISHQ9NSE2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.22□□□□□ -2.37
CISHQ9NSE2 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MIR487A-201ENST00000385009 80 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MTCO1P19-201ENST00000443487 500 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.21□□□□□ -2.38
CISHQ9NSE2 AC093850.1-201ENST00000454121 251 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.21□□□□□ -2.38
CISHQ9NSE2 RNA5SP454-201ENST00000517231 127 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.21□□□□□ -2.38
CISHQ9NSE2 AP003716.2-201ENST00000528260 108 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 AL137161.1-201ENST00000532231 390 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MRPS36P4-201ENST00000534436 298 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 ELOCP32-201ENST00000548625 324 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 AK6P2-201ENST00000549020 471 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MIR5583-1-201ENST00000580941 59 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MIR548AB-201ENST00000584917 84 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MIR3192-201ENST00000584920 77 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 RMST_3.1-201ENST00000611651 109 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 MTND5P16-201ENST00000460269 1703 ntBASIC0.21□□□□□ -2.38
CISHQ9NSE2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CISHQ9NSE2 RNA5SP264-201ENST00000363115 107 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 RNY1P8-201ENST00000383970 114 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 RNU6-245P-201ENST00000384020 107 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 RNU6-793P-201ENST00000384233 104 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 MIR562-201ENST00000384894 95 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 MIR450B-201ENST00000401182 78 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 MTCO2P8-201ENST00000412213 658 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 MTCYBP10-201ENST00000424905 650 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 RPL31P35-201ENST00000431058 377 ntBASIC0.2□□□□□ -2.38
CISHQ9NSE2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.2□□□□□ -2.38
CISHQ9NSE2 U8.21-201ENST00000459536 136 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms