Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AC022513.1-201ENST00000624512 117 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 MIR203B-201ENST00000636080 86 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 ZNF702P-202ENST00000434269 1966 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-926P-201ENST00000384075 107 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNY1P14-201ENST00000384426 108 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 MIR1185-2-201ENST00000408687 86 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 ELOCP21-201ENST00000412558 336 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AL353689.1-201ENST00000438895 199 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-221P-201ENST00000459541 99 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AC011406.1-201ENST00000512440 370 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AC074133.1-201ENST00000515696 183 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNU4-77P-201ENST00000516692 156 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AC018448.1-201ENST00000552843 316 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AC103810.6-201ENST00000606708 136 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 CTSLP2-204ENST00000629029 392 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 AL606534.2-204ENST00000635008 178 ntBASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-708P-201ENST00000384217 107 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 RNY3P4-201ENST00000384428 101 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.498-201ENST00000384460 102 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 RPL23AP7-203ENST00000449021 469 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 AL021397.1-201ENST00000451806 248 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 AC007485.1-201ENST00000616755 206 ntBASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.31-201ENST00000362574 102 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.80-201ENST00000362996 102 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-1264P-201ENST00000383891 107 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.485-201ENST00000384395 102 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 RNA5SP508-201ENST00000411327 119 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 TOMM22P2-201ENST00000430735 237 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-625P-201ENST00000459412 107 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 RNVU1-2-201ENST00000516326 135 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 AC025647.1-201ENST00000517879 253 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 SNORD58B-201ENST00000607313 66 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 AL138825.1-201ENST00000618587 192 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
ARFGAP3Q9NP61 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 Y_RNA.138-201ENST00000363462 102 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 RNA5SP126-201ENST00000365092 109 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 RNU6-474P-201ENST00000384243 107 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 SNORA48.1-201ENST00000390879 135 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 SNORD78.2-201ENST00000391076 69 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MTCO3P19-201ENST00000415864 321 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 AC016909.1-201ENST00000415916 166 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 AC008134.1-201ENST00000420943 193 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MTCO2P12-201ENST00000427426 682 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 YWHAEP4-201ENST00000505390 198 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 RNA5SP364-201ENST00000516938 78 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 RN7SKP295-201ENST00000517264 153 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MIR5188-201ENST00000583467 113 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 AL109918.3-201ENST00000603072 338 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ARFGAP3Q9NP61 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 Y_RNA.27-201ENST00000362540 103 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 RNU6-862P-201ENST00000362804 105 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 MCFD2P1-201ENST00000417812 300 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 AL160004.2-201ENST00000432935 350 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 FCF1P4-201ENST00000448326 183 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 HSBP1P1-201ENST00000555205 166 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 MIR4513-201ENST00000581077 86 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.9-201ENST00000615427 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.11-201ENST00000616345 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.2-201ENST00000616535 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.3-201ENST00000617785 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 U2.19-201ENST00000618602 191 ntBASIC2.32□□□□□ -2.04
ARFGAP3Q9NP61 RNU2-1-201ENST00000618664 191 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms