Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MIR5006-201ENST00000583027 110 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.55□□□□□ -2
USP29Q9HBJ7 RPL17P51-201ENST00000605218 238 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
USP29Q9HBJ7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
USP29Q9HBJ7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP29Q9HBJ7 RNU6-727P-201ENST00000363592 107 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 Y_RNA.483-201ENST00000384380 101 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 RNU6-713P-201ENST00000384761 107 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
USP29Q9HBJ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.54□□□□□ -2
USP29Q9HBJ7 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
USP29Q9HBJ7 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.54□□□□□ -2
USP29Q9HBJ7 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.54□□□□□ -2
USP29Q9HBJ7 AK6P2-201ENST00000549020 471 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC018448.1-201ENST00000552843 316 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.54□□□□□ -2
USP29Q9HBJ7 AC055872.1-201ENST00000570978 278 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
USP29Q9HBJ7 MIR376A1-201ENST00000616574 68 ntBASIC2.54□□□□□ -2
USP29Q9HBJ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.54□□□□□ -2
USP29Q9HBJ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
USP29Q9HBJ7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
USP29Q9HBJ7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.53□□□□□ -2
USP29Q9HBJ7 RNU6-626P-201ENST00000363354 107 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 RNU6-20P-201ENST00000384106 107 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.53□□□□□ -2
USP29Q9HBJ7 MIR449C-201ENST00000516047 92 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
USP29Q9HBJ7 AP002001.1-203ENST00000534002 267 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 MIR5739-201ENST00000619803 80 ntBASIC2.53□□□□□ -2
USP29Q9HBJ7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.53□□□□□ -2
USP29Q9HBJ7 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.401-201ENST00000383965 117 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AL033519.2-201ENST00000403958 392 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 UQCRBP2-201ENST00000447827 297 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AC107222.1-201ENST00000510899 637 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 RNU1-41P-201ENST00000516161 162 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 RNU1-48P-201ENST00000516400 162 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AC023157.2-201ENST00000540596 141 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 SNORD11B-201ENST00000607707 90 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 AC068205.3-201ENST00000636385 468 ntBASIC2.52□□□□□ -2.01
USP29Q9HBJ7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 MIR410-201ENST00000362222 80 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNA5SP240-201ENST00000365355 128 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNU6-102P-201ENST00000384485 104 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 MIR1302-6-201ENST00000408466 90 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNU6-1203P-201ENST00000410703 110 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNU6-625P-201ENST00000459412 107 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RPS23P5-201ENST00000495419 428 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNU6-496P-201ENST00000516145 99 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RNU6-570P-201ENST00000517051 105 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 AP001282.2-201ENST00000616149 309 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 AC008873.1-201ENST00000625051 138 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.51□□□□□ -2.01
USP29Q9HBJ7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP29Q9HBJ7 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 RNU1-23P-201ENST00000363361 144 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 SNORD113-8-201ENST00000363497 74 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 SNORD87-201ENST00000364849 89 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 RNU6-234P-201ENST00000365229 104 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 RNU2-48P-201ENST00000410694 191 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.5□□□□□ -2.01
USP29Q9HBJ7 RAB28P5-201ENST00000427490 651 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 HSPE1P25-201ENST00000455484 251 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 SNORD127-201ENST00000458892 86 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms