Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.34□□□□□ -1.56
RNF39Q9H2S5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF39Q9H2S5 MAPK10-328ENST00000641553 4009 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RNU6-824P-201ENST00000363724 104 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RNA5SP505-201ENST00000364748 108 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MIR516B2-201ENST00000385190 85 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RNU6-724P-201ENST00000390958 105 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RN7SL459P-201ENST00000481078 302 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RNA5SP168-201ENST00000516642 112 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RNA5SP468-201ENST00000516782 93 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MIR5089-201ENST00000580047 84 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MIR4433B-201ENST00000581329 102 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MIR3140-201ENST00000583685 90 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 AC008745.1-201ENST00000604064 271 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RN7SL722P-201ENST00000617780 284 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 RN7SL565P-201ENST00000618246 284 ntBASIC5.33□□□□□ -1.56
RNF39Q9H2S5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF39Q9H2S5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 RNU6-546P-201ENST00000383991 107 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 MIR192-201ENST00000384915 110 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 AC027119.1-201ENST00000440877 241 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 AC006463.2-201ENST00000473326 348 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 RNA5SP112-201ENST00000515937 99 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 RNA5SP147-201ENST00000516493 109 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF39Q9H2S5 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 AP000346.3-201ENST00000622821 210 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 GVINP1-202ENST00000531871 7271 ntBASIC5.32□□□□□ -1.56
RNF39Q9H2S5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 RNA5SP387-201ENST00000364226 106 ntBASIC5.31□□□□□ -1.56
RNF39Q9H2S5 Y_RNA.239-201ENST00000364444 113 ntBASIC5.31□□□□□ -1.56
RNF39Q9H2S5 AC073264.2-201ENST00000448886 166 ntBASIC5.31□□□□□ -1.56
RNF39Q9H2S5 RNU2-19P-201ENST00000517288 84 ntBASIC5.31□□□□□ -1.56
RNF39Q9H2S5 Z97988.1-201ENST00000637697 135 ntBASIC5.31□□□□□ -1.56
RNF39Q9H2S5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
RNF39Q9H2S5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 CEP170P1-201ENST00000502249 4587 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 RNU11-201ENST00000387069 134 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 MIR548F3-201ENST00000408509 87 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AL110118.1-201ENST00000553543 400 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AC138749.4-201ENST00000563970 127 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AL360012.1-201ENST00000602813 131 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 MIR6810-201ENST00000622701 70 ntBASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF39Q9H2S5 AC004656.1-201ENST00000568479 4951 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 AC023934.1-201ENST00000574529 2389 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 WWP1P1-201ENST00000466609 2769 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF39Q9H2S5 AC083843.2-201ENST00000568248 6253 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 RNU6-862P-201ENST00000362804 105 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 RPS16P5-201ENST00000406501 404 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 COX5BP7-201ENST00000414780 274 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 RNU6-752P-201ENST00000516376 102 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 RNU6-980P-201ENST00000516925 103 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 YPEL5P3-201ENST00000547227 352 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 MIR3920-201ENST00000581751 86 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 AC209154.1-201ENST00000582156 337 ntBASIC5.29□□□□□ -1.56
RNF39Q9H2S5 MIR548AR-201ENST00000582191 57 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms