Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPS26P42-201ENST00000413485 326 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 AC003685.2-201ENST00000422795 395 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS16Q9H269 AC145146.1-201ENST00000496370 254 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS16Q9H269 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS16Q9H269 AL138963.2-201ENST00000605137 226 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS16Q9H269 AL357075.2-201ENST00000614906 189 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS16Q9H269 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS16Q9H269 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS16Q9H269 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS16Q9H269 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS16Q9H269 SNORD115-8-201ENST00000363856 82 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 SNORD115-38-201ENST00000365037 82 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 RNU6-886P-201ENST00000384319 105 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 MIR95-201ENST00000385072 81 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 MIR23A-201ENST00000385245 73 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 MIR208B-201ENST00000401172 77 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 RNA5SP201-201ENST00000410316 124 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 RNU6-651P-201ENST00000411040 105 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS16Q9H269 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS16Q9H269 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS16Q9H269 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS16Q9H269 CBX3P4-201ENST00000538909 354 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS16Q9H269 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS16Q9H269 PCGEM1.1-201ENST00000613431 131 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
VPS16Q9H269 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS16Q9H269 MIR411-201ENST00000362239 96 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 Y_RNA.44-201ENST00000362676 108 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNU6-626P-201ENST00000363354 107 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNU6-137P-201ENST00000363680 108 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 U3.9-201ENST00000363823 204 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNU6-20P-201ENST00000384106 107 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 Y_RNA.446-201ENST00000384178 104 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 Y_RNA.570-201ENST00000384750 101 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 MIR548M-201ENST00000408260 86 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 AC063976.3-201ENST00000426849 329 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 AL138752.1-201ENST00000452964 351 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 Y_RNA.644-201ENST00000459006 113 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS16Q9H269 SEPT14P8-201ENST00000508026 178 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNA5SP356-201ENST00000515972 94 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 Y_RNA.674-201ENST00000516362 113 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNU6-1198P-201ENST00000516904 67 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 RNA5SP402-201ENST00000517148 110 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 AK6P2-201ENST00000549020 471 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 AL355297.2-201ENST00000604792 129 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 SNORD113-5-201ENST00000607261 78 ntBASIC2.66□□□□□ -1.98
VPS16Q9H269 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
VPS16Q9H269 AC062016.1-201ENST00000355719 319 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VPS16Q9H269 Y_RNA.83-201ENST00000363005 113 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 RNU6-740P-201ENST00000364734 105 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 RNU6-326P-201ENST00000365480 107 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 AC107393.1-201ENST00000512403 346 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS16Q9H269 SNORD116-28-201ENST00000516123 91 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 RNU2-31P-201ENST00000516954 155 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 SNORA48.11-201ENST00000517015 89 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS16Q9H269 AC011921.3-201ENST00000605540 361 ntBASIC2.65□□□□□ -1.99
VPS16Q9H269 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.64□□□□□ -1.99
VPS16Q9H269 ZNF271P-202ENST00000465539 1970 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU6-873P-201ENST00000363833 107 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 Y_RNA.199-201ENST00000364014 102 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 Y_RNA.270-201ENST00000364693 104 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU6-378P-201ENST00000384324 107 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU6-1274P-201ENST00000384557 107 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 MIR549A-201ENST00000385268 96 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 SNORA46.1-201ENST00000391069 153 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 AL033519.2-201ENST00000403958 392 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 Y_RNA.597-201ENST00000410463 100 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU5A-5P-201ENST00000411054 116 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS16Q9H269 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS16Q9H269 AC010095.1-201ENST00000443543 144 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 AL513328.1-201ENST00000446460 224 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RPL23AP3-201ENST00000453844 468 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS16Q9H269 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS16Q9H269 SNORA40.9-201ENST00000515895 93 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU6-406P-201ENST00000516470 107 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU6-966P-201ENST00000516479 104 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 RNU7-110P-201ENST00000516891 62 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 AC055872.1-201ENST00000570978 278 ntBASIC2.64□□□□□ -1.99
VPS16Q9H269 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS16Q9H269 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms