Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-794P-201ENST00000517261 64 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 RNU1-104P-201ENST00000517280 175 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.44□□□□□ -2.02
CDT1Q9H211 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CDT1Q9H211 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AC012433.1-201ENST00000588916 398 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CDT1Q9H211 AC005520.5-201ENST00000613926 164 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AP001282.2-201ENST00000616149 309 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
CDT1Q9H211 RNU6-879P-201ENST00000364328 108 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 RNU6-937P-201ENST00000384325 106 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 Y_RNA.476-201ENST00000384347 108 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 Y_RNA.526-201ENST00000384572 110 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 SNORA46.1-201ENST00000391069 153 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 Y_RNA.618-201ENST00000410949 107 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 RPS26P42-201ENST00000413485 326 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 RNU6-586P-201ENST00000517265 104 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 MIR4300-201ENST00000581016 96 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 AC005357.1-201ENST00000588399 301 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 AL357075.2-201ENST00000614906 189 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 MIR5739-201ENST00000619803 80 ntBASIC2.43□□□□□ -2.02
CDT1Q9H211 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.43□□□□□ -2.02
CDT1Q9H211 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDT1Q9H211 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
CDT1Q9H211 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CDT1Q9H211 Y_RNA.14-201ENST00000362415 103 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 Y_RNA.60-201ENST00000362831 98 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 Y_RNA.288-201ENST00000364854 92 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU6-102P-201ENST00000384485 104 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU6-713P-201ENST00000384761 107 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 MIR329-1-201ENST00000385028 80 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 MIR29B2-201ENST00000385055 81 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU6-159P-201ENST00000391080 106 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU1-139P-201ENST00000391307 165 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 Y_RNA.597-201ENST00000410463 100 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 RNU6-1203P-201ENST00000410703 110 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 SDAD1P3-201ENST00000427380 333 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 Y_RNA.673-201ENST00000516306 88 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 HSPE1P18-201ENST00000517602 280 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 EIF4A1P12-201ENST00000551910 141 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 MIR5695-201ENST00000579717 85 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.42□□□□□ -2.02
CDT1Q9H211 AC005296.1-201ENST00000616145 209 ntBASIC2.42□□□□□ -2.02
CDT1Q9H211 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDT1Q9H211 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDT1Q9H211 U3.9-201ENST00000363823 204 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 RNU6-961P-201ENST00000363893 105 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 RNU6-944P-201ENST00000364023 107 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 Y_RNA.319-201ENST00000365138 92 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 Y_RNA.439-201ENST00000384119 94 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 Y_RNA.541-201ENST00000384640 113 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 Y_RNA.562-201ENST00000384695 113 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 RNU6-541P-201ENST00000384709 110 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 RNU6-1001P-201ENST00000411265 100 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.41□□□□□ -2.02
CDT1Q9H211 RPL26P26-201ENST00000480251 434 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 CKS1BP2-201ENST00000497342 240 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.41□□□□□ -2.02
CDT1Q9H211 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
CDT1Q9H211 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.41□□□□□ -2.02
CDT1Q9H211 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 AC010297.1-201ENST00000623948 149 ntBASIC2.41□□□□□ -2.02
CDT1Q9H211 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDT1Q9H211 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CDT1Q9H211 Y_RNA.237-201ENST00000364439 102 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 Y_RNA.286-201ENST00000364813 102 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 Y_RNA.350-201ENST00000365409 98 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 Y_RNA.518-201ENST00000384552 113 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CDT1Q9H211 SNORD12B-201ENST00000410433 91 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.4□□□□□ -2.03
CDT1Q9H211 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
CDT1Q9H211 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDT1Q9H211 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 MTND4LP30-201ENST00000454092 297 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 TRBVB-201ENST00000477100 408 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 RPS29P21-201ENST00000496272 170 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.4□□□□□ -2.03
CDT1Q9H211 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.4□□□□□ -2.03
CDT1Q9H211 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.4□□□□□ -2.03
CDT1Q9H211 RNU6-1114P-201ENST00000516022 107 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 RNU6-966P-201ENST00000516479 104 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.4□□□□□ -2.03
CDT1Q9H211 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 DEFB122-202ENST00000569013 197 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 AC055872.1-201ENST00000570978 278 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms