Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MIR4273-201ENST00000582824 84 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 MIR4753-201ENST00000585119 83 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AL355073.2-201ENST00000612106 557 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC022306.2-201ENST00000617563 647 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC099654.14-201ENST00000638599 341 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 ZNF209P-201ENST00000593450 2304 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 SNORD115-32-201ENST00000364079 82 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 SNORA18.2-201ENST00000383865 132 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC138393.2-201ENST00000414742 246 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC107399.1-201ENST00000451226 265 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 MTND4P17-201ENST00000470444 350 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 DEFB131C-201ENST00000528817 165 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC005668.1-201ENST00000571142 476 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC016727.2-201ENST00000603988 621 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC099654.5-201ENST00000636479 350 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
CCSER1Q9C0I3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RNU6-1059P-201ENST00000363752 98 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RNU6-842P-201ENST00000384269 107 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RNU6-296P-201ENST00000384608 107 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 SNORA12.2-201ENST00000391040 156 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 MIR320B2-201ENST00000408479 138 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC243428.1-201ENST00000421099 264 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 MTCO3P29-201ENST00000432119 779 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RPS3AP52-201ENST00000435639 297 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 Z82188.1-201ENST00000436709 154 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC010531.2-201ENST00000465012 153 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC067942.3-201ENST00000512025 362 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC026782.1-201ENST00000512952 449 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RNU6-1016P-201ENST00000516689 94 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 SNORA20.3-201ENST00000516880 132 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 RNU6-856P-201ENST00000516959 98 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 MIR4801-201ENST00000582704 82 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC018462.2-201ENST00000605375 395 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC016727.1-205ENST00000605437 569 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 AC005562.2-201ENST00000618264 111 ntBASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.53□□□□□ -2.16
CCSER1Q9C0I3 BX322639.1-202ENST00000423987 2213 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.88-201ENST00000363029 99 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 SNORD115-8-201ENST00000363856 82 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 SNORD115-38-201ENST00000365037 82 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.394-201ENST00000383942 103 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.482-201ENST00000384377 111 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 RPL37P10-201ENST00000412884 288 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 snoU13.30-201ENST00000458951 104 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AC091951.2-201ENST00000500762 203 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.691-201ENST00000516611 103 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 RNA5SP54-201ENST00000516951 92 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
CCSER1Q9C0I3 RNU6-595P-201ENST00000363944 107 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RNU1-96P-201ENST00000364163 162 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 SNORD81.2-201ENST00000365153 76 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.490-201ENST00000384413 102 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 MIR32-201ENST00000384965 70 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 MIR1283-1-201ENST00000408494 87 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RNU6-1304P-201ENST00000411374 106 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 AC098614.3-201ENST00000438957 440 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 AC004386.2-201ENST00000441858 148 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RPS29P29-201ENST00000456396 171 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RPL26P26-201ENST00000480251 434 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 HMGN1P12-201ENST00000499125 195 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 AC103851.1-201ENST00000506833 274 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RNU6-948P-201ENST00000516374 107 ntBASIC1.51□□□□□ -2.17
CCSER1Q9C0I3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms