Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 AL049830.2-201ENST00000480072 201 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.703-201ENST00000516846 111 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 AC022616.8-201ENST00000533569 253 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 RNU2-4P-201ENST00000606190 192 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.15-201ENST00000611544 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.16-201ENST00000613119 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.12-201ENST00000613778 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.9-201ENST00000615427 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.11-201ENST00000616345 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.2-201ENST00000616535 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.3-201ENST00000617785 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.19-201ENST00000618602 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 RNU2-1-201ENST00000618664 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.6-201ENST00000619225 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.5-201ENST00000619465 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 U2.10-201ENST00000620268 191 ntBASIC3.32□□□□□ -1.88
LRRC3Q9BY71 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LRRC3Q9BY71 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.8-201ENST00000362353 102 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC008134.1-201ENST00000420943 193 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AL159169.1-201ENST00000421119 127 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 RNU6-221P-201ENST00000459541 99 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 RNU6-255P-201ENST00000516957 105 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 RNU6-1212P-201ENST00000517023 104 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC100767.1-201ENST00000528178 123 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC006386.2-201ENST00000624491 75 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 AC012005.1-201ENST00000624575 75 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 SCARNA15.3-201ENST00000626315 122 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 SCARNA4.1-201ENST00000628597 123 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 MIR622-201ENST00000638396 96 ntBASIC3.31□□□□□ -1.88
LRRC3Q9BY71 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.124-201ENST00000363339 93 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 RNU6-1205P-201ENST00000363625 106 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.182-201ENST00000363880 111 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.238-201ENST00000364441 102 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 RNU6-418P-201ENST00000384035 107 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.510-201ENST00000384511 114 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 SNORA8.3-201ENST00000384679 139 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 RN7SKP220-201ENST00000410611 288 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AL121890.1-201ENST00000435457 205 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 RPL23AP7-203ENST00000449021 469 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC016925.1-201ENST00000458303 298 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC010409.1-201ENST00000487382 476 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 RNU6-789P-201ENST00000517105 102 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC3Q9BY71 MRPS18CP4-201ENST00000535821 231 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC3Q9BY71 MIR3133-201ENST00000583157 78 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC3Q9BY71 AC104465.1-201ENST00000611365 139 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 MIR1248-201ENST00000629190 106 ntBASIC3.3□□□□□ -1.88
LRRC3Q9BY71 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LRRC3Q9BY71 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 AL355596.1-201ENST00000565399 3996 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 RNU6-1235P-201ENST00000384559 107 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 MIR518C-201ENST00000384822 101 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 MIR1289-1-201ENST00000408836 144 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 HMGN2P18-201ENST00000450680 270 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 RNU6-498P-201ENST00000459468 107 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 AC010598.1-201ENST00000510378 103 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 Y_RNA.802-201ENST00000614892 130 ntBASIC3.29□□□□□ -1.88
LRRC3Q9BY71 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC3Q9BY71 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRC3Q9BY71 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LRRC3Q9BY71 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRC3Q9BY71 AL035425.3-201ENST00000564206 4996 ntBASIC3.28□□□□□ -1.88
LRRC3Q9BY71 SNORD114-7-201ENST00000362520 77 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms