Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR5739-201ENST00000619803 80 ntBASIC1.34□□□□□ -2.19
RSPO3Q9BXY4 AC090517.3-201ENST00000625170 141 ntBASIC1.34□□□□□ -2.19
RSPO3Q9BXY4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RSPO3Q9BXY4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.34□□□□□ -2.2
RSPO3Q9BXY4 RNY1P16-201ENST00000363063 111 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU6-99P-201ENST00000364721 107 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 MIR32-201ENST00000384965 70 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNA5SP212-201ENST00000391223 107 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC004866.1-201ENST00000411748 78 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AL445305.1-201ENST00000432577 575 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AL161788.1-201ENST00000441805 169 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.653-201ENST00000459091 95 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 U8.22-201ENST00000459141 133 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 MIR2053-201ENST00000459295 91 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC022493.2-201ENST00000506122 481 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC093303.1-201ENST00000514549 295 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU6-470P-201ENST00000515954 104 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 RNU6-586P-201ENST00000517265 104 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC016256.1-201ENST00000547971 354 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 MIR3923-201ENST00000579521 83 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 MIR4303-201ENST00000581299 66 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC103810.8-201ENST00000607347 118 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AL355802.3-201ENST00000607571 545 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC022202.1-201ENST00000613515 211 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 AC126177.8-201ENST00000618339 1015 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 SCARNA4-201ENST00000629045 128 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 MIR1248-201ENST00000629190 106 ntBASIC1.33□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNY3P11-201ENST00000364153 102 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU4-9P-201ENST00000364951 139 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 MIR518A2-201ENST00000384966 87 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 MIR208B-201ENST00000401172 77 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 MIR1276-201ENST00000408707 83 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 CHEK2P4-201ENST00000450340 246 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 CYP2C59P-201ENST00000457790 269 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 snoU13.30-201ENST00000458951 104 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-965P-201ENST00000516721 96 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1153P-201ENST00000516760 105 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 RNU6-699P-201ENST00000517081 110 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AL590705.4-201ENST00000532209 134 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AC027288.2-201ENST00000553028 243 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AL132822.1-201ENST00000617063 513 ntBASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RSPO3Q9BXY4 AL391987.6-201ENST00000305671 199 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR369-201ENST00000362155 70 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RNU6-222P-201ENST00000362438 107 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RNA5SP240-201ENST00000365355 128 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 SNORD42.2-201ENST00000365570 69 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RNU6-474P-201ENST00000384243 107 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MTND2P29-201ENST00000438595 412 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 RPL17P19-201ENST00000489069 552 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC105758.1-201ENST00000506038 399 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms